Experiment: heptadecanoic 250 uM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv3206c and Rv3207c are separated by 90 nucleotides Rv3207c and Rv3208 are separated by 345 nucleotides
Rv3206c: Rv3206c - Probable molybdenum cofactor biosynthesis protein MoeB1 (MPT-synthase sulfurylase) (molybdopterin synthase sulphurylase), at 3,582,532 to 3,583,710
Rv3206c
Rv3207c: Rv3207c - Conserved protein, at 3,583,801 to 3,584,658
Rv3207c
Rv3208: Rv3208 - Probable transcriptional regulatory protein (probably TetR-family), at 3,585,004 to 3,585,690
Rv3208
Position (kb)
3583
3584
3585 Strain fitness (log2 ratio)
-1
0
1
2 at 3583.727 kb on + strand at 3583.728 kb on - strand at 3584.000 kb on + strand, within Rv3207c at 3584.001 kb on - strand, within Rv3207c at 3584.017 kb on + strand, within Rv3207c at 3584.018 kb on - strand, within Rv3207c at 3584.018 kb on - strand, within Rv3207c at 3584.111 kb on + strand, within Rv3207c at 3584.111 kb on + strand, within Rv3207c at 3584.340 kb on - strand, within Rv3207c at 3584.592 kb on - strand at 3584.649 kb on - strand at 3584.792 kb on - strand at 3584.923 kb on + strand at 3584.926 kb on + strand at 3584.926 kb on + strand at 3584.926 kb on + strand at 3584.927 kb on - strand at 3584.927 kb on - strand at 3584.927 kb on - strand at 3584.981 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction heptadecanoic 250 uM (C) remove 3,583,727 + +2.2 3,583,728 - -0.3 3,584,000 + Rv3207c 0.23 +0.6 3,584,001 - Rv3207c 0.23 +1.1 3,584,017 + Rv3207c 0.25 +2.5 3,584,018 - Rv3207c 0.25 +0.7 3,584,018 - Rv3207c 0.25 +1.0 3,584,111 + Rv3207c 0.36 +2.1 3,584,111 + Rv3207c 0.36 +1.2 3,584,340 - Rv3207c 0.63 +1.0 3,584,592 - +0.9 3,584,649 - +0.3 3,584,792 - +0.8 3,584,923 + -0.6 3,584,926 + +1.0 3,584,926 + +0.3 3,584,926 + -0.0 3,584,927 - -0.5 3,584,927 - -0.0 3,584,927 - -0.1 3,584,981 + -0.5
Or see this region's nucleotide sequence