Experiment: heptadecanoic 250 uM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2513 and Rv2514c are separated by 293 nucleotides Rv2514c and Rv2515c are separated by 5 nucleotides Rv2515c and Rv2516c are separated by 118 nucleotides Rv2516c and Rv2517c overlap by 4 nucleotides
Rv2513: Rv2513 - Hypothetical protein, at 2,830,161 to 2,830,583
Rv2513
Rv2514c: Rv2514c - Conserved hypothetical protein, at 2,830,877 to 2,831,338
Rv2514c
Rv2515c: Rv2515c - Conserved hypothetical protein, at 2,831,344 to 2,832,591
Rv2515c
Rv2516c: Rv2516c - Hypothetical protein, at 2,832,710 to 2,833,513
Rv2516c
Rv2517c: Rv2517c - Unknown protein, at 2,833,510 to 2,833,761
Rv2517c
Position (kb)
2831
2832
2833 Strain fitness (log2 ratio)
-1
0
1
2 at 2830.352 kb on + strand, within Rv2513 at 2830.582 kb on - strand at 2830.615 kb on - strand at 2830.809 kb on - strand at 2831.332 kb on - strand at 2831.474 kb on + strand, within Rv2515c at 2831.685 kb on - strand, within Rv2515c at 2831.685 kb on - strand, within Rv2515c at 2831.958 kb on + strand, within Rv2515c at 2831.958 kb on + strand, within Rv2515c at 2831.959 kb on - strand, within Rv2515c at 2832.056 kb on + strand, within Rv2515c at 2832.056 kb on + strand, within Rv2515c at 2832.056 kb on + strand, within Rv2515c at 2832.209 kb on - strand, within Rv2515c at 2832.307 kb on + strand, within Rv2515c at 2832.366 kb on - strand, within Rv2515c
Per-strain Table
Position Strand Gene LocusTag Fraction heptadecanoic 250 uM (C) remove 2,830,352 + Rv2513 0.45 -0.2 2,830,582 - -1.7 2,830,615 - -0.0 2,830,809 - -0.3 2,831,332 - +1.2 2,831,474 + Rv2515c 0.10 +0.5 2,831,685 - Rv2515c 0.27 -0.2 2,831,685 - Rv2515c 0.27 -0.2 2,831,958 + Rv2515c 0.49 -0.4 2,831,958 + Rv2515c 0.49 +0.5 2,831,959 - Rv2515c 0.49 -1.7 2,832,056 + Rv2515c 0.57 +0.1 2,832,056 + Rv2515c 0.57 +0.7 2,832,056 + Rv2515c 0.57 +0.0 2,832,209 - Rv2515c 0.69 +0.2 2,832,307 + Rv2515c 0.77 +0.1 2,832,366 - Rv2515c 0.82 +1.9
Or see this region's nucleotide sequence