Experiment: butyrate 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0711 and Rv0712 are separated by 47 nucleotides Rv0712 and Rv0713 are separated by 300 nucleotides
Rv0711: Rv0711 - Possible arylsulfatase AtsA (aryl-sulfate sulphohydrolase) (arylsulphatase), at 806,335 to 808,698
Rv0711
Rv0712: Rv0712 - Conserved protein, at 808,746 to 809,645
Rv0712
Rv0713: Rv0713 - Probable conserved transmembrane protein, at 809,946 to 810,887
Rv0713
Position (kb) 808
809
810 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 808.054 kb on + strand, within Rv0711 at 808.055 kb on - strand, within Rv0711 at 808.114 kb on + strand, within Rv0711 at 808.138 kb on + strand, within Rv0711 at 808.139 kb on - strand, within Rv0711 at 808.139 kb on - strand, within Rv0711 at 808.144 kb on + strand, within Rv0711 at 808.145 kb on - strand, within Rv0711 at 808.145 kb on - strand, within Rv0711 at 808.145 kb on - strand, within Rv0711 at 808.319 kb on - strand, within Rv0711 at 808.319 kb on - strand, within Rv0711 at 808.325 kb on - strand, within Rv0711 at 808.582 kb on + strand at 808.582 kb on + strand at 809.054 kb on - strand, within Rv0712 at 809.125 kb on + strand, within Rv0712 at 809.154 kb on + strand, within Rv0712 at 809.232 kb on + strand, within Rv0712 at 809.232 kb on + strand, within Rv0712 at 809.233 kb on - strand, within Rv0712 at 809.233 kb on - strand, within Rv0712 at 809.421 kb on + strand, within Rv0712 at 809.421 kb on + strand, within Rv0712 at 809.422 kb on - strand, within Rv0712 at 809.544 kb on + strand, within Rv0712 at 809.716 kb on + strand at 809.717 kb on - strand at 810.284 kb on + strand, within Rv0713 at 810.307 kb on - strand, within Rv0713 at 810.337 kb on - strand, within Rv0713 at 810.413 kb on + strand, within Rv0713 at 810.413 kb on + strand, within Rv0713 at 810.413 kb on + strand, within Rv0713 at 810.413 kb on + strand, within Rv0713 at 810.414 kb on - strand, within Rv0713 at 810.417 kb on + strand, within Rv0713 at 810.417 kb on + strand, within Rv0713 at 810.417 kb on + strand, within Rv0713 at 810.417 kb on + strand, within Rv0713 at 810.417 kb on + strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.474 kb on + strand, within Rv0713 at 810.475 kb on - strand, within Rv0713 at 810.475 kb on - strand, within Rv0713
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate 10 mM (C) remove 808,054 + Rv0711 0.73 +0.0 808,055 - Rv0711 0.73 +1.4 808,114 + Rv0711 0.75 -0.4 808,138 + Rv0711 0.76 +1.0 808,139 - Rv0711 0.76 -0.1 808,139 - Rv0711 0.76 +0.9 808,144 + Rv0711 0.77 -0.5 808,145 - Rv0711 0.77 -0.5 808,145 - Rv0711 0.77 -0.3 808,145 - Rv0711 0.77 +0.4 808,319 - Rv0711 0.84 -0.3 808,319 - Rv0711 0.84 -0.0 808,325 - Rv0711 0.84 -0.0 808,582 + -1.3 808,582 + +1.2 809,054 - Rv0712 0.34 -1.2 809,125 + Rv0712 0.42 -0.3 809,154 + Rv0712 0.45 -3.0 809,232 + Rv0712 0.54 -0.7 809,232 + Rv0712 0.54 -0.8 809,233 - Rv0712 0.54 +0.0 809,233 - Rv0712 0.54 -0.3 809,421 + Rv0712 0.75 -1.1 809,421 + Rv0712 0.75 -1.3 809,422 - Rv0712 0.75 -0.4 809,544 + Rv0712 0.89 -0.1 809,716 + -0.2 809,717 - -0.3 810,284 + Rv0713 0.36 -0.9 810,307 - Rv0713 0.38 -0.2 810,337 - Rv0713 0.42 -0.3 810,413 + Rv0713 0.50 -1.6 810,413 + Rv0713 0.50 +0.1 810,413 + Rv0713 0.50 +0.1 810,413 + Rv0713 0.50 +2.3 810,414 - Rv0713 0.50 -0.3 810,417 + Rv0713 0.50 +2.9 810,417 + Rv0713 0.50 +1.0 810,417 + Rv0713 0.50 -0.7 810,417 + Rv0713 0.50 +0.8 810,417 + Rv0713 0.50 -0.2 810,418 - Rv0713 0.50 +0.9 810,418 - Rv0713 0.50 -0.3 810,418 - Rv0713 0.50 -0.5 810,418 - Rv0713 0.50 -0.9 810,418 - Rv0713 0.50 -0.9 810,474 + Rv0713 0.56 -0.4 810,475 - Rv0713 0.56 -0.4 810,475 - Rv0713 0.56 +0.9
Or see this region's nucleotide sequence