Experiment: butyrate 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0774c and Rv0775 are separated by 55 nucleotides Rv0775 and Rv0776c overlap by 47 nucleotides Rv0776c and Rv0777 are separated by 244 nucleotides
Rv0774c: Rv0774c - Probable conserved exported protein, at 867,440 to 868,351
Rv0774c
Rv0775: Rv0775 - Conserved hypothetical protein, at 868,407 to 869,030
Rv0775
Rv0776c: Rv0776c - Conserved hypothetical protein, at 868,984 to 869,763
Rv0776c
Rv0777: Rv0777 - Probable adenylosuccinate lyase PurB (adenylosuccinase) (ASL) (ASASE), at 870,008 to 871,426
Rv0777
Position (kb) 868
869
870 Strain fitness (log2 ratio) -2
-1
0
1
2 at 867.483 kb on - strand at 868.384 kb on + strand at 868.385 kb on - strand at 868.452 kb on + strand at 868.453 kb on - strand at 868.508 kb on - strand, within Rv0775 at 868.508 kb on - strand, within Rv0775 at 868.553 kb on + strand, within Rv0775 at 868.553 kb on + strand, within Rv0775 at 868.560 kb on + strand, within Rv0775 at 868.561 kb on - strand, within Rv0775 at 868.561 kb on - strand, within Rv0775 at 868.561 kb on - strand, within Rv0775 at 868.563 kb on + strand, within Rv0775 at 868.564 kb on - strand, within Rv0775 at 868.769 kb on + strand, within Rv0775 at 868.770 kb on - strand, within Rv0775 at 868.892 kb on + strand, within Rv0775 at 868.892 kb on + strand, within Rv0775 at 868.892 kb on + strand, within Rv0775 at 868.892 kb on + strand, within Rv0775 at 868.893 kb on - strand, within Rv0775 at 868.893 kb on - strand, within Rv0775 at 869.060 kb on + strand at 869.061 kb on - strand at 869.081 kb on + strand, within Rv0776c at 869.114 kb on + strand, within Rv0776c at 869.115 kb on - strand, within Rv0776c at 869.134 kb on + strand, within Rv0776c at 869.290 kb on + strand, within Rv0776c at 869.291 kb on - strand, within Rv0776c at 869.291 kb on - strand, within Rv0776c at 869.388 kb on - strand, within Rv0776c at 869.388 kb on - strand, within Rv0776c at 869.431 kb on - strand, within Rv0776c at 869.859 kb on + strand at 869.860 kb on - strand at 869.966 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate 10 mM (C) remove 867,483 - -2.7 868,384 + +0.7 868,385 - +0.1 868,452 + +0.9 868,453 - +0.1 868,508 - Rv0775 0.16 +1.0 868,508 - Rv0775 0.16 -0.3 868,553 + Rv0775 0.23 +0.5 868,553 + Rv0775 0.23 -0.1 868,560 + Rv0775 0.25 -1.1 868,561 - Rv0775 0.25 +0.4 868,561 - Rv0775 0.25 +2.3 868,561 - Rv0775 0.25 -0.4 868,563 + Rv0775 0.25 +0.5 868,564 - Rv0775 0.25 +1.7 868,769 + Rv0775 0.58 -0.3 868,770 - Rv0775 0.58 -0.9 868,892 + Rv0775 0.78 +0.6 868,892 + Rv0775 0.78 +0.0 868,892 + Rv0775 0.78 +1.5 868,892 + Rv0775 0.78 -0.0 868,893 - Rv0775 0.78 -0.2 868,893 - Rv0775 0.78 -0.1 869,060 + -0.2 869,061 - +0.4 869,081 + Rv0776c 0.12 +2.7 869,114 + Rv0776c 0.17 +0.9 869,115 - Rv0776c 0.17 -0.6 869,134 + Rv0776c 0.19 -0.3 869,290 + Rv0776c 0.39 +0.3 869,291 - Rv0776c 0.39 -0.9 869,291 - Rv0776c 0.39 +0.0 869,388 - Rv0776c 0.52 -0.0 869,388 - Rv0776c 0.52 -0.4 869,431 - Rv0776c 0.57 +0.3 869,859 + -0.7 869,860 - +0.2 869,966 + -0.6
Or see this region's nucleotide sequence