Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3258c

Experiment: casaminos 1 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos 1 mg/mL (C)
3,638,759	+				-1.6
3,638,813	-				+0.4
3,639,506	+		Rv3259	0.19	+2.3
3,639,506	+		Rv3259	0.19	+1.1
3,639,506	+		Rv3259	0.19	-0.3
3,639,507	-		Rv3259	0.20	+0.0
3,639,843	-				-0.4
3,639,843	-				-0.4
3,640,265	-				-0.7
3,640,298	-				+1.7