Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2267c

Experiment: casaminos 1 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos 1 mg/mL (C)
2,541,052	+		Rv2266	0.74	+0.6
2,541,185	+		Rv2266	0.84	+3.3
2,541,254	+		Rv2266	0.89	-1.0
2,541,378	+				-0.1
2,541,415	-				-0.0
2,541,416	+				-0.5
2,541,416	+				-0.6
2,541,416	+				-0.3
2,541,417	-				-0.7
2,541,417	-				-1.7
2,541,453	+				+0.2
2,541,453	+				-0.3
2,541,454	-				-0.8
2,541,781	-		Rv2267c	0.12	+0.2
2,541,802	-		Rv2267c	0.14	-1.3
2,541,822	+		Rv2267c	0.15	-0.2
2,541,973	-		Rv2267c	0.28	-0.3
2,542,028	+		Rv2267c	0.33	+0.3
2,542,046	-		Rv2267c	0.34	-0.3
2,542,069	-		Rv2267c	0.36	+0.2
2,542,119	-		Rv2267c	0.41	+0.2
2,542,147	+		Rv2267c	0.43	+1.2
2,542,235	+		Rv2267c	0.51	+0.4
2,542,336	+		Rv2267c	0.59	-0.5
2,542,337	-		Rv2267c	0.59	+0.6
2,542,337	-		Rv2267c	0.59	+0.9
2,542,900	+				-0.6
2,543,172	+		Rv2268c	0.25	-0.4
2,543,246	+		Rv2268c	0.30	-0.1