Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1303

Experiment: casaminos 1 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos 1 mg/mL (C)
1,459,486	+				-0.3
1,459,487	-				+0.1
1,459,490	-				-0.3
1,459,490	-				-0.1
1,459,508	-				+0.7
1,459,550	+				-0.6
1,459,550	+				-1.4
1,459,551	-				+0.6
1,459,551	-				+0.2
1,459,560	+				-0.3
1,459,571	+				+0.7
1,459,624	+				-0.0
1,459,653	+				+0.8
1,459,653	+				+0.2
1,459,695	+				-0.8
1,459,695	+				-0.3
1,460,195	+		Rv1303	0.88	+1.4