Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1282c

Experiment: casaminos 1 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos 1 mg/mL (C)
1,434,488	-		Rv1281c	0.57	+1.0
1,434,524	-		Rv1281c	0.59	+2.0
1,434,587	-		Rv1281c	0.63	-0.4
1,434,955	+		Rv1281c	0.83	-1.0
1,435,133	+				+0.1
1,435,187	-				-0.5
1,435,366	+		Rv1282c	0.11	-0.6
1,435,367	-		Rv1282c	0.11	+0.7
1,435,594	+		Rv1282c	0.37	-0.3
1,435,595	-		Rv1282c	0.37	-0.4
1,435,770	-		Rv1282c	0.57	+0.2
1,436,007	+		Rv1282c	0.84	+0.3
1,436,037	+		Rv1282c	0.88	-0.9
1,436,097	-				-1.4
1,436,115	-				-0.4
1,436,175	-				+1.4
1,436,229	+				-0.3
1,436,489	+		Rv1283c	0.36	-0.3
1,437,048	-				-0.8
1,437,084	-				+0.9
1,437,084	-				-0.3
1,437,107	+				-0.8