Experiment: casaminos 1 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0791c and Rv0792c overlap by 4 nucleotides Rv0792c and Rv0793 are separated by 72 nucleotides Rv0793 and Rv0794c are separated by 112 nucleotides
Rv0791c: Rv0791c - Conserved protein, at 884,797 to 885,840
Rv0791c
Rv0792c: Rv0792c - Probable transcriptional regulatory protein (probably GntR-family), at 885,837 to 886,646
Rv0792c
Rv0793: Rv0793 - Possible monooxygenase, at 886,719 to 887,024
Rv0793
Rv0794c: Rv0794c - Probable oxidoreductase, at 887,137 to 888,636
Rv0794c
Position (kb) 885
886
887 Strain fitness (log2 ratio) -2
-1
0
1
2 at 884.859 kb on - strand at 884.859 kb on - strand at 884.918 kb on + strand, within Rv0791c at 884.919 kb on - strand, within Rv0791c at 885.285 kb on - strand, within Rv0791c at 885.380 kb on + strand, within Rv0791c at 885.381 kb on - strand, within Rv0791c at 885.491 kb on + strand, within Rv0791c at 885.492 kb on - strand, within Rv0791c at 885.685 kb on + strand, within Rv0791c at 885.970 kb on + strand, within Rv0792c at 886.030 kb on - strand, within Rv0792c at 886.030 kb on - strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.084 kb on - strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.232 kb on + strand, within Rv0792c at 886.320 kb on - strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.423 kb on - strand, within Rv0792c at 886.835 kb on + strand, within Rv0793 at 886.836 kb on - strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.840 kb on - strand, within Rv0793 at 886.935 kb on + strand, within Rv0793 at 886.936 kb on - strand, within Rv0793 at 886.944 kb on + strand, within Rv0793 at 886.944 kb on + strand, within Rv0793 at 886.944 kb on + strand, within Rv0793 at 887.138 kb on + strand at 887.613 kb on - strand, within Rv0794c
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos 1 mg/mL (C) remove 884,859 - -0.7 884,859 - +1.3 884,918 + Rv0791c 0.12 -0.6 884,919 - Rv0791c 0.12 -0.4 885,285 - Rv0791c 0.47 +1.8 885,380 + Rv0791c 0.56 +0.4 885,381 - Rv0791c 0.56 +0.4 885,491 + Rv0791c 0.66 -0.8 885,492 - Rv0791c 0.67 -0.4 885,685 + Rv0791c 0.85 -0.0 885,970 + Rv0792c 0.16 +0.8 886,030 - Rv0792c 0.24 -0.0 886,030 - Rv0792c 0.24 +0.7 886,083 + Rv0792c 0.30 -0.9 886,083 + Rv0792c 0.30 +0.3 886,083 + Rv0792c 0.30 -0.4 886,084 - Rv0792c 0.30 -0.2 886,111 + Rv0792c 0.34 -0.6 886,111 + Rv0792c 0.34 -0.5 886,111 + Rv0792c 0.34 -2.7 886,111 + Rv0792c 0.34 -1.2 886,112 - Rv0792c 0.34 +0.4 886,112 - Rv0792c 0.34 -0.3 886,112 - Rv0792c 0.34 -0.1 886,112 - Rv0792c 0.34 -0.3 886,232 + Rv0792c 0.49 -0.8 886,320 - Rv0792c 0.60 -0.0 886,400 + Rv0792c 0.70 +0.6 886,400 + Rv0792c 0.70 -2.0 886,400 + Rv0792c 0.70 -0.1 886,423 - Rv0792c 0.72 -0.4 886,835 + Rv0793 0.38 +0.5 886,836 - Rv0793 0.38 -0.5 886,839 + Rv0793 0.39 +0.0 886,839 + Rv0793 0.39 -1.3 886,839 + Rv0793 0.39 +0.1 886,839 + Rv0793 0.39 -0.8 886,840 - Rv0793 0.40 -0.4 886,935 + Rv0793 0.71 +0.1 886,936 - Rv0793 0.71 -0.5 886,944 + Rv0793 0.74 -0.7 886,944 + Rv0793 0.74 +1.8 886,944 + Rv0793 0.74 -0.0 887,138 + -0.7 887,613 - Rv0794c 0.32 -0.5
Or see this region's nucleotide sequence