Experiment: D-Trehalose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0655 and Rv0656c are separated by 387 nucleotides Rv0656c and Rv0657c are separated by 94 nucleotides Rv0657c and Rv0658c are separated by 75 nucleotides
Rv0655: Rv0655 - Possible ribonucleotide-transport ATP-binding protein ABC transporter Mkl, at 751,517 to 752,596
Rv0655
Rv0656c: Rv0656c - Possible toxin VapC6, at 752,984 to 753,367
Rv0656c
Rv0657c: Rv0657c - Possible antitoxin VapB6, at 753,462 to 753,617
Rv0657c
Rv0658c: Rv0658c - Probable conserved integral membrane protein, at 753,693 to 754,409
Rv0658c
Position (kb) 752
753
754 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 752.023 kb on + strand, within Rv0655 at 752.024 kb on - strand, within Rv0655 at 752.024 kb on - strand, within Rv0655 at 752.268 kb on + strand, within Rv0655 at 752.268 kb on + strand, within Rv0655 at 752.268 kb on + strand, within Rv0655 at 752.269 kb on - strand, within Rv0655 at 752.594 kb on + strand at 752.595 kb on - strand at 752.647 kb on - strand at 752.659 kb on - strand at 752.730 kb on + strand at 752.730 kb on + strand at 752.731 kb on - strand at 752.731 kb on - strand at 752.731 kb on - strand at 752.731 kb on - strand at 752.764 kb on - strand at 752.986 kb on - strand at 753.048 kb on + strand, within Rv0656c at 753.071 kb on + strand, within Rv0656c at 753.072 kb on - strand, within Rv0656c at 753.072 kb on - strand, within Rv0656c at 753.074 kb on + strand, within Rv0656c at 753.074 kb on + strand, within Rv0656c at 753.074 kb on + strand, within Rv0656c at 753.074 kb on + strand, within Rv0656c at 753.074 kb on + strand, within Rv0656c at 753.075 kb on - strand, within Rv0656c at 753.211 kb on - strand, within Rv0656c at 753.211 kb on - strand, within Rv0656c at 753.445 kb on + strand at 753.446 kb on - strand at 753.446 kb on - strand at 753.628 kb on + strand at 753.628 kb on + strand at 753.628 kb on + strand at 753.629 kb on - strand at 753.629 kb on - strand at 753.641 kb on + strand at 753.641 kb on + strand at 753.641 kb on + strand at 753.641 kb on + strand at 753.642 kb on - strand at 753.642 kb on - strand at 753.642 kb on - strand at 753.642 kb on - strand at 753.642 kb on - strand at 753.648 kb on + strand at 753.648 kb on + strand at 753.649 kb on - strand at 753.654 kb on + strand at 753.654 kb on + strand at 753.654 kb on + strand at 753.655 kb on - strand at 753.658 kb on + strand at 753.706 kb on - strand at 753.732 kb on + strand at 753.747 kb on + strand at 753.783 kb on + strand, within Rv0658c at 753.797 kb on - strand, within Rv0658c at 754.047 kb on + strand, within Rv0658c at 754.332 kb on + strand, within Rv0658c
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 10 mM (C) remove 752,023 + Rv0655 0.47 -1.5 752,024 - Rv0655 0.47 -0.5 752,024 - Rv0655 0.47 -0.8 752,268 + Rv0655 0.70 -1.8 752,268 + Rv0655 0.70 +0.5 752,268 + Rv0655 0.70 -0.4 752,269 - Rv0655 0.70 -0.2 752,594 + +0.5 752,595 - -0.8 752,647 - -0.3 752,659 - -0.9 752,730 + -0.4 752,730 + +0.4 752,731 - +0.9 752,731 - -0.5 752,731 - +0.2 752,731 - -0.2 752,764 - -0.8 752,986 - -0.2 753,048 + Rv0656c 0.17 -0.2 753,071 + Rv0656c 0.23 -1.1 753,072 - Rv0656c 0.23 -1.1 753,072 - Rv0656c 0.23 +1.0 753,074 + Rv0656c 0.23 -1.5 753,074 + Rv0656c 0.23 -0.4 753,074 + Rv0656c 0.23 -0.2 753,074 + Rv0656c 0.23 -0.8 753,074 + Rv0656c 0.23 -0.4 753,075 - Rv0656c 0.24 +0.2 753,211 - Rv0656c 0.59 +0.9 753,211 - Rv0656c 0.59 -0.6 753,445 + +0.9 753,446 - -2.7 753,446 - +0.2 753,628 + -0.5 753,628 + -0.2 753,628 + -0.3 753,629 - -0.0 753,629 - +2.4 753,641 + -0.1 753,641 + +0.4 753,641 + -0.6 753,641 + -0.5 753,642 - -0.1 753,642 - -0.7 753,642 - -0.3 753,642 - -0.1 753,642 - -0.3 753,648 + +0.3 753,648 + +1.0 753,649 - +0.8 753,654 + -0.2 753,654 + +1.9 753,654 + -0.2 753,655 - +1.0 753,658 + -0.6 753,706 - +2.9 753,732 + +1.5 753,747 + +0.1 753,783 + Rv0658c 0.13 +0.1 753,797 - Rv0658c 0.15 -1.5 754,047 + Rv0658c 0.49 +0.6 754,332 + Rv0658c 0.89 +0.1
Or see this region's nucleotide sequence