Experiment: D-Trehalose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0263c and Rv0264c are separated by 16 nucleotides Rv0264c and Rv0265c are separated by 95 nucleotides Rv0265c and Rv0266c are separated by 21 nucleotides
Rv0263c: Rv0263c - Conserved hypothetical protein, at 314,864 to 315,766
Rv0263c
Rv0264c: Rv0264c - Conserved hypothetical protein, at 315,783 to 316,415
Rv0264c
Rv0265c: Rv0265c - Probable periplasmic iron-transport lipoprotein, at 316,511 to 317,503
Rv0265c
Rv0266c: Rv0266c - Probable 5-oxoprolinase OplA (5-oxo-L-prolinase) (pyroglutamase) (5-OPASE), at 317,525 to 321,154
Rv0266c
Position (kb) 316
317
318 Strain fitness (log2 ratio) -1
0
1 at 315.908 kb on - strand, within Rv0264c at 315.908 kb on - strand, within Rv0264c at 315.908 kb on - strand, within Rv0264c at 315.909 kb on + strand, within Rv0264c at 316.502 kb on - strand at 317.091 kb on + strand, within Rv0265c at 317.091 kb on + strand, within Rv0265c at 317.091 kb on + strand, within Rv0265c at 317.092 kb on - strand, within Rv0265c at 317.095 kb on + strand, within Rv0265c at 317.095 kb on + strand, within Rv0265c at 317.096 kb on - strand, within Rv0265c at 317.096 kb on - strand, within Rv0265c at 317.096 kb on - strand, within Rv0265c at 317.141 kb on + strand, within Rv0265c at 317.142 kb on - strand, within Rv0265c at 317.186 kb on + strand, within Rv0265c at 317.377 kb on + strand, within Rv0265c at 317.377 kb on + strand, within Rv0265c at 317.378 kb on - strand, within Rv0265c at 317.378 kb on - strand, within Rv0265c at 317.382 kb on - strand, within Rv0265c at 317.709 kb on + strand at 317.828 kb on + strand at 317.932 kb on - strand, within Rv0266c at 317.970 kb on + strand, within Rv0266c at 317.973 kb on + strand, within Rv0266c at 317.974 kb on - strand, within Rv0266c at 317.974 kb on - strand, within Rv0266c at 317.974 kb on - strand, within Rv0266c at 317.974 kb on - strand, within Rv0266c at 318.146 kb on - strand, within Rv0266c at 318.210 kb on + strand, within Rv0266c at 318.210 kb on + strand, within Rv0266c at 318.210 kb on + strand, within Rv0266c at 318.210 kb on + strand, within Rv0266c
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 10 mM (C) remove 315,908 - Rv0264c 0.20 -0.5 315,908 - Rv0264c 0.20 -0.4 315,908 - Rv0264c 0.20 +0.6 315,909 + Rv0264c 0.20 +1.4 316,502 - -0.4 317,091 + Rv0265c 0.58 -0.7 317,091 + Rv0265c 0.58 -0.5 317,091 + Rv0265c 0.58 +0.9 317,092 - Rv0265c 0.59 -0.5 317,095 + Rv0265c 0.59 -0.1 317,095 + Rv0265c 0.59 +0.3 317,096 - Rv0265c 0.59 -0.2 317,096 - Rv0265c 0.59 -1.4 317,096 - Rv0265c 0.59 -0.2 317,141 + Rv0265c 0.63 -0.5 317,142 - Rv0265c 0.64 -1.4 317,186 + Rv0265c 0.68 +0.5 317,377 + Rv0265c 0.87 -0.4 317,377 + Rv0265c 0.87 -0.5 317,378 - Rv0265c 0.87 -0.1 317,378 - Rv0265c 0.87 -0.1 317,382 - Rv0265c 0.88 -0.1 317,709 + +0.8 317,828 + -0.2 317,932 - Rv0266c 0.11 +0.4 317,970 + Rv0266c 0.12 -0.2 317,973 + Rv0266c 0.12 +0.9 317,974 - Rv0266c 0.12 -1.4 317,974 - Rv0266c 0.12 -0.4 317,974 - Rv0266c 0.12 -0.2 317,974 - Rv0266c 0.12 -0.8 318,146 - Rv0266c 0.17 -0.7 318,210 + Rv0266c 0.19 -0.4 318,210 + Rv0266c 0.19 -0.1 318,210 + Rv0266c 0.19 -0.4 318,210 + Rv0266c 0.19 -0.2
Or see this region's nucleotide sequence