Experiment: L-Lactate 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv3266c and Rv3267 are separated by 75 nucleotides Rv3267 and Rv3268 are separated by 38 nucleotides Rv3268 and Rv3269 are separated by 124 nucleotides
Rv3266c: Rv3266c - dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD (dTDP-rhamnose modification protein) (dTDP-rhamnose biosynthesis protein) (dTDP-rhamnose synthase), at 3,646,895 to 3,647,809
Rv3266c
Rv3267: Rv3267 - Conserved protein (CPSA-related protein), at 3,647,885 to 3,649,381
Rv3267
Rv3268: Rv3268 - Conserved hypothetical protein, at 3,649,420 to 3,650,109
Rv3268
Rv3269: Rv3269 - Conserved protein, at 3,650,234 to 3,650,515
Rv3269
Position (kb)
3647
3648
3649
3650 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3647.882 kb on - strand at 3647.882 kb on - strand at 3648.246 kb on - strand, within Rv3267 at 3648.269 kb on - strand, within Rv3267 at 3648.269 kb on - strand, within Rv3267 at 3649.229 kb on + strand, within Rv3267 at 3649.258 kb on + strand at 3649.457 kb on - strand at 3649.459 kb on + strand at 3649.460 kb on - strand at 3649.460 kb on - strand at 3649.460 kb on - strand at 3649.583 kb on + strand, within Rv3268 at 3649.649 kb on + strand, within Rv3268 at 3649.810 kb on + strand, within Rv3268 at 3649.829 kb on + strand, within Rv3268 at 3649.844 kb on + strand, within Rv3268 at 3649.844 kb on + strand, within Rv3268 at 3649.845 kb on - strand, within Rv3268 at 3649.882 kb on - strand, within Rv3268 at 3650.147 kb on + strand at 3650.167 kb on + strand at 3650.241 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate 10 mM (C) remove 3,647,882 - -1.0 3,647,882 - -1.0 3,648,246 - Rv3267 0.24 +1.2 3,648,269 - Rv3267 0.26 -1.5 3,648,269 - Rv3267 0.26 -1.1 3,649,229 + Rv3267 0.90 -1.9 3,649,258 + -2.3 3,649,457 - +0.1 3,649,459 + +0.1 3,649,460 - +1.5 3,649,460 - +1.2 3,649,460 - -0.7 3,649,583 + Rv3268 0.24 -0.5 3,649,649 + Rv3268 0.33 +0.3 3,649,810 + Rv3268 0.57 +0.0 3,649,829 + Rv3268 0.59 +0.1 3,649,844 + Rv3268 0.61 -0.2 3,649,844 + Rv3268 0.61 -0.1 3,649,845 - Rv3268 0.62 +2.1 3,649,882 - Rv3268 0.67 -0.3 3,650,147 + -0.4 3,650,167 + -0.6 3,650,241 + +1.2
Or see this region's nucleotide sequence