Experiment: L-Lactate 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0668 and Rv0669c are separated by 363 nucleotides Rv0669c and Rv0670 are separated by 194 nucleotides Rv0670 and Rv0671 are separated by 31 nucleotides
Rv0668: Rv0668 - DNA-directed RNA polymerase (beta, at 763,370 to 767,320
Rv0668
Rv0669c: Rv0669c - Possible hydrolase, at 767,684 to 769,597
Rv0669c
Rv0670: Rv0670 - Probable endonuclease IV End (endodeoxyribonuclease IV) (apurinase), at 769,792 to 770,550
Rv0670
Rv0671: Rv0671 - Possible conserved lipoprotein LpqP, at 770,582 to 771,424
Rv0671
Position (kb) 767
768
769
770 Strain fitness (log2 ratio) -1
0
1 at 767.243 kb on + strand at 767.243 kb on + strand at 767.246 kb on + strand at 767.297 kb on + strand at 767.298 kb on - strand at 767.318 kb on + strand at 767.319 kb on - strand at 767.565 kb on + strand at 767.566 kb on - strand at 767.725 kb on + strand at 767.726 kb on - strand at 767.726 kb on - strand at 767.726 kb on - strand at 767.726 kb on - strand at 767.726 kb on - strand at 767.773 kb on - strand at 767.925 kb on + strand, within Rv0669c at 767.950 kb on + strand, within Rv0669c at 768.000 kb on + strand, within Rv0669c at 768.205 kb on - strand, within Rv0669c at 768.240 kb on + strand, within Rv0669c at 768.240 kb on + strand, within Rv0669c at 768.240 kb on + strand, within Rv0669c at 768.249 kb on + strand, within Rv0669c at 768.370 kb on - strand, within Rv0669c at 768.370 kb on - strand, within Rv0669c at 768.678 kb on + strand, within Rv0669c at 768.679 kb on - strand, within Rv0669c at 768.679 kb on - strand, within Rv0669c at 768.679 kb on - strand, within Rv0669c at 768.679 kb on - strand, within Rv0669c at 768.892 kb on - strand, within Rv0669c at 768.924 kb on + strand, within Rv0669c at 768.925 kb on - strand, within Rv0669c at 768.925 kb on - strand, within Rv0669c at 768.983 kb on - strand, within Rv0669c at 769.036 kb on + strand, within Rv0669c at 769.051 kb on + strand, within Rv0669c at 769.051 kb on + strand, within Rv0669c at 769.051 kb on + strand, within Rv0669c at 769.270 kb on - strand, within Rv0669c at 769.270 kb on - strand, within Rv0669c at 769.345 kb on - strand, within Rv0669c at 769.348 kb on + strand, within Rv0669c at 769.357 kb on - strand, within Rv0669c at 769.586 kb on + strand at 769.586 kb on + strand at 769.664 kb on - strand at 769.706 kb on - strand at 769.781 kb on - strand at 769.860 kb on - strand at 769.951 kb on + strand, within Rv0670 at 769.951 kb on + strand, within Rv0670 at 769.951 kb on + strand, within Rv0670 at 769.951 kb on + strand, within Rv0670 at 769.952 kb on - strand, within Rv0670 at 769.952 kb on - strand, within Rv0670 at 770.171 kb on - strand, within Rv0670 at 770.341 kb on - strand, within Rv0670 at 770.570 kb on + strand at 770.571 kb on - strand at 770.582 kb on - strand at 770.582 kb on - strand at 770.582 kb on - strand at 770.582 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate 10 mM (C) remove 767,243 + +0.1 767,243 + -0.4 767,246 + +0.6 767,297 + +0.3 767,298 - +0.0 767,318 + +0.6 767,319 - -0.4 767,565 + +0.1 767,566 - -1.4 767,725 + -0.0 767,726 - -0.4 767,726 - +0.0 767,726 - -0.4 767,726 - -0.8 767,726 - +0.2 767,773 - +0.4 767,925 + Rv0669c 0.13 -0.3 767,950 + Rv0669c 0.14 -0.2 768,000 + Rv0669c 0.17 -0.8 768,205 - Rv0669c 0.27 +0.3 768,240 + Rv0669c 0.29 +0.9 768,240 + Rv0669c 0.29 +0.7 768,240 + Rv0669c 0.29 +0.3 768,249 + Rv0669c 0.30 -0.3 768,370 - Rv0669c 0.36 -0.1 768,370 - Rv0669c 0.36 +0.2 768,678 + Rv0669c 0.52 -0.9 768,679 - Rv0669c 0.52 -0.6 768,679 - Rv0669c 0.52 -0.1 768,679 - Rv0669c 0.52 -0.1 768,679 - Rv0669c 0.52 +0.5 768,892 - Rv0669c 0.63 +0.4 768,924 + Rv0669c 0.65 +0.8 768,925 - Rv0669c 0.65 +0.6 768,925 - Rv0669c 0.65 -0.3 768,983 - Rv0669c 0.68 +0.3 769,036 + Rv0669c 0.71 +0.9 769,051 + Rv0669c 0.71 +0.7 769,051 + Rv0669c 0.71 -0.8 769,051 + Rv0669c 0.71 +0.9 769,270 - Rv0669c 0.83 +0.1 769,270 - Rv0669c 0.83 +1.1 769,345 - Rv0669c 0.87 -0.3 769,348 + Rv0669c 0.87 -0.4 769,357 - Rv0669c 0.87 -0.2 769,586 + -0.5 769,586 + -0.4 769,664 - -0.4 769,706 - -0.7 769,781 - +0.3 769,860 - -1.4 769,951 + Rv0670 0.21 +0.9 769,951 + Rv0670 0.21 -0.2 769,951 + Rv0670 0.21 +0.6 769,951 + Rv0670 0.21 +0.3 769,952 - Rv0670 0.21 -0.2 769,952 - Rv0670 0.21 -0.9 770,171 - Rv0670 0.50 -0.1 770,341 - Rv0670 0.72 -0.0 770,570 + -0.1 770,571 - -1.5 770,582 - -0.9 770,582 - -0.3 770,582 - -0.4 770,582 - +0.4
Or see this region's nucleotide sequence