Experiment: L-Lactate 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0572c and Rv0573c are separated by 467 nucleotides Rv0573c and Rv0574c are separated by 9 nucleotides
Rv0572c: Rv0572c - Hypothetical protein, at 665,042 to 665,383
Rv0572c
Rv0573c: Rv0573c - Nicotinic acid phosphoribosyltransferase PncB2, at 665,851 to 667,242
Rv0573c
Rv0574c: Rv0574c - Conserved hypothetical protein, at 667,252 to 668,394
Rv0574c
Position (kb) 665
666
667
668 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 664.861 kb on - strand at 664.919 kb on + strand at 664.920 kb on - strand at 664.925 kb on - strand at 664.973 kb on + strand at 665.045 kb on + strand at 665.046 kb on - strand at 665.133 kb on + strand, within Rv0572c at 665.134 kb on - strand, within Rv0572c at 665.134 kb on - strand, within Rv0572c at 665.212 kb on - strand, within Rv0572c at 665.214 kb on + strand, within Rv0572c at 665.214 kb on + strand, within Rv0572c at 665.215 kb on - strand, within Rv0572c at 665.338 kb on + strand, within Rv0572c at 665.339 kb on - strand, within Rv0572c at 665.419 kb on + strand at 665.420 kb on - strand at 665.488 kb on - strand at 665.492 kb on - strand at 665.543 kb on + strand at 665.543 kb on + strand at 665.543 kb on + strand at 665.543 kb on + strand at 665.544 kb on - strand at 665.544 kb on - strand at 665.546 kb on - strand at 665.670 kb on + strand at 665.670 kb on + strand at 665.670 kb on + strand at 665.829 kb on + strand at 665.972 kb on + strand at 666.260 kb on + strand, within Rv0573c at 666.261 kb on - strand, within Rv0573c at 666.539 kb on - strand, within Rv0573c at 666.548 kb on + strand, within Rv0573c at 666.549 kb on - strand, within Rv0573c at 666.549 kb on - strand, within Rv0573c at 666.717 kb on - strand, within Rv0573c at 667.028 kb on + strand, within Rv0573c at 667.104 kb on - strand at 667.254 kb on - strand at 667.472 kb on + strand, within Rv0574c at 667.473 kb on - strand, within Rv0574c at 667.473 kb on - strand, within Rv0574c at 667.473 kb on - strand, within Rv0574c at 667.524 kb on - strand, within Rv0574c at 667.572 kb on - strand, within Rv0574c at 667.572 kb on - strand, within Rv0574c at 667.572 kb on - strand, within Rv0574c at 667.572 kb on - strand, within Rv0574c at 667.573 kb on + strand, within Rv0574c at 667.573 kb on + strand, within Rv0574c at 667.574 kb on - strand, within Rv0574c at 667.574 kb on - strand, within Rv0574c at 667.676 kb on + strand, within Rv0574c at 667.677 kb on - strand, within Rv0574c at 667.709 kb on - strand, within Rv0574c at 668.087 kb on + strand, within Rv0574c
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate 10 mM (C) remove 664,861 - +1.8 664,919 + +0.3 664,920 - -0.0 664,925 - +1.4 664,973 + -0.1 665,045 + +0.2 665,046 - +0.7 665,133 + Rv0572c 0.27 -0.8 665,134 - Rv0572c 0.27 +1.4 665,134 - Rv0572c 0.27 -0.3 665,212 - Rv0572c 0.50 +0.2 665,214 + Rv0572c 0.50 -0.8 665,214 + Rv0572c 0.50 -0.2 665,215 - Rv0572c 0.51 -0.2 665,338 + Rv0572c 0.87 -0.0 665,339 - Rv0572c 0.87 -0.1 665,419 + -1.8 665,420 - -1.0 665,488 - +0.0 665,492 - +0.2 665,543 + -0.4 665,543 + +0.2 665,543 + -0.2 665,543 + +0.1 665,544 - -0.1 665,544 - -0.6 665,546 - +1.6 665,670 + -0.1 665,670 + +0.2 665,670 + +1.1 665,829 + -0.7 665,972 + -0.2 666,260 + Rv0573c 0.29 +0.3 666,261 - Rv0573c 0.29 -1.0 666,539 - Rv0573c 0.49 -0.8 666,548 + Rv0573c 0.50 -0.2 666,549 - Rv0573c 0.50 -0.8 666,549 - Rv0573c 0.50 -0.6 666,717 - Rv0573c 0.62 -0.9 667,028 + Rv0573c 0.85 -2.8 667,104 - -0.9 667,254 - -0.6 667,472 + Rv0574c 0.19 +0.5 667,473 - Rv0574c 0.19 -1.5 667,473 - Rv0574c 0.19 +1.7 667,473 - Rv0574c 0.19 -1.5 667,524 - Rv0574c 0.24 -1.8 667,572 - Rv0574c 0.28 -0.2 667,572 - Rv0574c 0.28 +0.9 667,572 - Rv0574c 0.28 -0.4 667,572 - Rv0574c 0.28 -1.2 667,573 + Rv0574c 0.28 -0.1 667,573 + Rv0574c 0.28 -0.2 667,574 - Rv0574c 0.28 -1.2 667,574 - Rv0574c 0.28 +2.3 667,676 + Rv0574c 0.37 -0.2 667,677 - Rv0574c 0.37 -0.5 667,709 - Rv0574c 0.40 -0.1 668,087 + Rv0574c 0.73 -0.4
Or see this region's nucleotide sequence