Experiment: D-Lactate 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2697c and Rv2698 are separated by 25 nucleotides Rv2698 and Rv2699c are separated by 4 nucleotides Rv2699c and Rv2700 are separated by 237 nucleotides Rv2700 and Rv2701c are separated by 9 nucleotides
Rv2697c: Rv2697c - Probable deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (dUTPase) (dUTP pyrophosphatase) (deoxyuridine 5'-triphosphatase) (dUTP diphosphatase) (deoxyuridine-triphosphatase), at 3,013,683 to 3,014,147
Rv2697c
Rv2698: Rv2698 - Probable conserved alanine rich transmembrane protein, at 3,014,173 to 3,014,658
Rv2698
Rv2699c: Rv2699c - Conserved hypothetical protein, at 3,014,663 to 3,014,965
Rv2699c
Rv2700: Rv2700 - Possible conserved secreted alanine rich protein, at 3,015,203 to 3,015,853
Rv2700
Rv2701c: Rv2701c - Inositol-1-monophosphatase SuhB, at 3,015,863 to 3,016,735
Rv2701c
Position (kb)
3014
3015 Strain fitness (log2 ratio)
-2
-1
0
1 at 3014.661 kb on + strand at 3014.661 kb on + strand at 3014.662 kb on - strand at 3015.073 kb on - strand at 3015.100 kb on - strand at 3015.100 kb on - strand at 3015.100 kb on - strand at 3015.135 kb on + strand at 3015.136 kb on - strand at 3015.136 kb on - strand at 3015.192 kb on - strand at 3015.899 kb on + strand at 3015.899 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate 10 mM (C) remove 3,014,661 + -0.5 3,014,661 + -0.4 3,014,662 - +0.1 3,015,073 - -0.2 3,015,100 - -0.2 3,015,100 - +1.2 3,015,100 - -0.0 3,015,135 + +0.4 3,015,136 - -1.1 3,015,136 - -0.8 3,015,192 - +0.1 3,015,899 + -1.8 3,015,899 + -0.3
Or see this region's nucleotide sequence