Experiment: 7H9 with Sulfaquinoxaline 0.097 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2508c and Rv2509 are separated by 84 nucleotides Rv2509 and Rv2510c are separated by 3 nucleotides Rv2510c and Rv2511 are separated by 67 nucleotides Rv2511 and GFF2615 are separated by 49 nucleotides
Rv2508c: Rv2508c - Probable conserved integral membrane leucine and alanine rich protein, at 2,823,256 to 2,824,593
Rv2508c
Rv2509: Rv2509 - Probable short-chain type dehydrogenase/reductase, at 2,824,678 to 2,825,484
Rv2509
Rv2510c: Rv2510c - Conserved protein, at 2,825,488 to 2,827,089
Rv2510c
Rv2511: Rv2511 - Oligoribonuclease Orn, at 2,827,157 to 2,827,804
Rv2511
GFF2615 - tRNA-His, at 2,827,854 to 2,827,926
GFF2615
Position (kb)
2825
2826
2827
2828 Strain fitness (log2 ratio)
-1
0
1
2 at 2824.606 kb on - strand at 2824.606 kb on - strand at 2824.658 kb on + strand at 2824.659 kb on - strand at 2824.659 kb on - strand at 2825.482 kb on + strand at 2825.737 kb on + strand, within Rv2510c at 2825.957 kb on + strand, within Rv2510c at 2825.958 kb on - strand, within Rv2510c at 2826.255 kb on + strand, within Rv2510c at 2826.256 kb on - strand, within Rv2510c at 2826.615 kb on + strand, within Rv2510c at 2827.029 kb on - strand at 2827.090 kb on - strand at 2827.090 kb on - strand at 2827.103 kb on + strand at 2827.103 kb on + strand at 2827.103 kb on + strand at 2827.144 kb on + strand at 2828.006 kb on + strand at 2828.006 kb on + strand at 2828.007 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Sulfaquinoxaline 0.097 mM remove 2,824,606 - +0.2 2,824,606 - -0.8 2,824,658 + -0.5 2,824,659 - -0.2 2,824,659 - +0.1 2,825,482 + -0.2 2,825,737 + Rv2510c 0.16 +1.8 2,825,957 + Rv2510c 0.29 +0.1 2,825,958 - Rv2510c 0.29 -1.0 2,826,255 + Rv2510c 0.48 -0.2 2,826,256 - Rv2510c 0.48 -0.2 2,826,615 + Rv2510c 0.70 -1.3 2,827,029 - -0.1 2,827,090 - -0.1 2,827,090 - -0.2 2,827,103 + -0.2 2,827,103 + -0.7 2,827,103 + -0.4 2,827,144 + -0.0 2,828,006 + -0.1 2,828,006 + +0.7 2,828,007 - -0.4
Or see this region's nucleotide sequence