Experiment: 7H9 with Sulfaquinoxaline 0.097 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2370c and Rv2371 are separated by 194 nucleotides Rv2371 and Rv2372c are separated by 98 nucleotides Rv2372c and Rv2373c are separated by 13 nucleotides
Rv2370c: Rv2370c - Conserved hypothetical protein, at 2,650,245 to 2,651,558
Rv2370c
Rv2371: Rv2371 - PE-PGRS family protein PE_PGRS40, at 2,651,753 to 2,651,938
Rv2371
Rv2372c: Rv2372c - Conserved hypothetical protein, at 2,652,037 to 2,652,825
Rv2372c
Rv2373c: Rv2373c - Probable chaperone protein DnaJ2, at 2,652,839 to 2,653,987
Rv2373c
Position (kb)
2652
2653 Strain fitness (log2 ratio)
-1
0
1 at 2651.084 kb on - strand, within Rv2370c at 2651.084 kb on - strand, within Rv2370c at 2651.271 kb on + strand, within Rv2370c at 2651.272 kb on - strand, within Rv2370c at 2651.304 kb on + strand, within Rv2370c at 2651.413 kb on - strand, within Rv2370c at 2651.569 kb on + strand at 2651.570 kb on - strand at 2651.578 kb on - strand at 2651.645 kb on + strand at 2651.734 kb on + strand at 2651.734 kb on + strand at 2651.735 kb on - strand at 2652.060 kb on - strand at 2652.060 kb on - strand at 2652.350 kb on - strand, within Rv2372c at 2652.625 kb on - strand, within Rv2372c at 2652.625 kb on - strand, within Rv2372c at 2652.625 kb on - strand, within Rv2372c at 2652.766 kb on + strand at 2652.767 kb on - strand at 2652.807 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Sulfaquinoxaline 0.097 mM remove 2,651,084 - Rv2370c 0.64 +0.2 2,651,084 - Rv2370c 0.64 -0.2 2,651,271 + Rv2370c 0.78 -0.4 2,651,272 - Rv2370c 0.78 +0.3 2,651,304 + Rv2370c 0.81 -0.4 2,651,413 - Rv2370c 0.89 +0.7 2,651,569 + -0.3 2,651,570 - +0.8 2,651,578 - +0.1 2,651,645 + -0.5 2,651,734 + -0.1 2,651,734 + -0.4 2,651,735 - -0.0 2,652,060 - -1.1 2,652,060 - -0.2 2,652,350 - Rv2372c 0.40 -1.0 2,652,625 - Rv2372c 0.75 -1.5 2,652,625 - Rv2372c 0.75 +0.1 2,652,625 - Rv2372c 0.75 -0.0 2,652,766 + -0.1 2,652,767 - +0.6 2,652,807 - +0.6
Or see this region's nucleotide sequence