Experiment: 7H9 with Sulfaquinoxaline 0.097 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0217c and Rv0218 are separated by 92 nucleotides Rv0218 and Rv0219 are separated by 1 nucleotides Rv0219 and Rv0220 are separated by 9 nucleotides
Rv0216: Rv0216 - Double hotdog hydratase, at 258,913 to 259,926
Rv0216
Rv0217c: Rv0217c - Possible esterase LipW, at 259,923 to 260,831
Rv0217c
Rv0218: Rv0218 - Probable conserved transmembrane protein, at 260,924 to 262,252
Rv0218
Rv0219: Rv0219 - Probable conserved transmembrane protein, at 262,254 to 262,802
Rv0219
Rv0220: Rv0220 - Probable esterase LipC, at 262,812 to 264,023
Rv0220
Position (kb) 260
261
262
263 Strain fitness (log2 ratio) -1
0
1
2 at 259.924 kb on + strand at 259.935 kb on - strand at 259.974 kb on - strand at 260.050 kb on - strand, within Rv0217c at 260.157 kb on + strand, within Rv0217c at 260.209 kb on + strand, within Rv0217c at 260.209 kb on + strand, within Rv0217c at 260.209 kb on + strand, within Rv0217c at 260.210 kb on - strand, within Rv0217c at 260.255 kb on - strand, within Rv0217c at 260.302 kb on + strand, within Rv0217c at 260.455 kb on + strand, within Rv0217c at 260.584 kb on - strand, within Rv0217c at 260.702 kb on + strand, within Rv0217c at 261.131 kb on + strand, within Rv0218 at 261.131 kb on + strand, within Rv0218 at 261.131 kb on + strand, within Rv0218 at 261.132 kb on - strand, within Rv0218 at 261.133 kb on + strand, within Rv0218 at 261.134 kb on - strand, within Rv0218 at 261.134 kb on - strand, within Rv0218 at 261.431 kb on + strand, within Rv0218 at 261.432 kb on - strand, within Rv0218 at 261.438 kb on - strand, within Rv0218 at 261.511 kb on + strand, within Rv0218 at 261.888 kb on + strand, within Rv0218 at 262.048 kb on + strand, within Rv0218 at 262.344 kb on + strand, within Rv0219 at 262.551 kb on + strand, within Rv0219 at 262.632 kb on + strand, within Rv0219 at 262.632 kb on + strand, within Rv0219 at 262.632 kb on + strand, within Rv0219 at 262.723 kb on - strand, within Rv0219 at 262.868 kb on - strand at 262.889 kb on + strand at 262.890 kb on - strand at 263.246 kb on - strand, within Rv0220
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Sulfaquinoxaline 0.097 mM remove 259,924 + +0.3 259,935 - +0.8 259,974 - -0.5 260,050 - Rv0217c 0.14 -0.4 260,157 + Rv0217c 0.26 +0.3 260,209 + Rv0217c 0.31 -0.0 260,209 + Rv0217c 0.31 -0.4 260,209 + Rv0217c 0.31 +0.2 260,210 - Rv0217c 0.32 +0.1 260,255 - Rv0217c 0.37 +0.3 260,302 + Rv0217c 0.42 -0.2 260,455 + Rv0217c 0.59 +0.6 260,584 - Rv0217c 0.73 -0.4 260,702 + Rv0217c 0.86 -0.6 261,131 + Rv0218 0.16 +0.5 261,131 + Rv0218 0.16 -0.5 261,131 + Rv0218 0.16 -0.1 261,132 - Rv0218 0.16 +2.4 261,133 + Rv0218 0.16 -0.0 261,134 - Rv0218 0.16 +0.3 261,134 - Rv0218 0.16 +0.0 261,431 + Rv0218 0.38 +1.1 261,432 - Rv0218 0.38 +0.2 261,438 - Rv0218 0.39 +0.1 261,511 + Rv0218 0.44 -0.1 261,888 + Rv0218 0.73 +1.3 262,048 + Rv0218 0.85 +1.8 262,344 + Rv0219 0.16 -0.8 262,551 + Rv0219 0.54 -1.3 262,632 + Rv0219 0.69 +0.4 262,632 + Rv0219 0.69 -1.2 262,632 + Rv0219 0.69 -1.4 262,723 - Rv0219 0.85 +1.3 262,868 - -0.2 262,889 + +0.7 262,890 - -0.2 263,246 - Rv0220 0.36 -0.8
Or see this region's nucleotide sequence