Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3629c

Experiment: 7H9 with Pretomanid 0.213 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Pretomanid 0.213 ug/mL
4,067,902	+				+2.3
4,067,920	+				-0.1
4,067,991	-				+3.7
4,068,032	-				+0.3
4,068,105	-		Rv3629c	0.13	+0.0
4,068,147	+		Rv3629c	0.17	+0.1
4,068,153	+		Rv3629c	0.18	+0.1
4,068,154	-		Rv3629c	0.18	+0.1
4,068,183	+		Rv3629c	0.21	-1.0
4,068,183	+		Rv3629c	0.21	-1.0
4,068,183	+		Rv3629c	0.21	+0.1
4,068,183	+		Rv3629c	0.21	-0.0
4,068,184	-		Rv3629c	0.21	-0.0
4,068,184	-		Rv3629c	0.21	+0.9
4,068,253	+		Rv3629c	0.27	-1.3
4,068,253	+		Rv3629c	0.27	+1.5
4,068,254	-		Rv3629c	0.27	+1.1
4,068,254	-		Rv3629c	0.27	+0.5
4,068,315	+		Rv3629c	0.33	-0.1
4,068,429	+		Rv3629c	0.43	-0.4
4,068,429	+		Rv3629c	0.43	-0.5
4,068,429	+		Rv3629c	0.43	-0.5
4,068,430	-		Rv3629c	0.43	+1.9
4,068,430	-		Rv3629c	0.43	-0.4
4,068,430	-		Rv3629c	0.43	-0.8
4,068,530	+		Rv3629c	0.52	+0.4
4,068,530	+		Rv3629c	0.52	+0.4
4,068,696	+		Rv3629c	0.67	+1.1
4,068,696	+		Rv3629c	0.67	-1.4
4,068,696	+		Rv3629c	0.67	+0.3
4,068,697	-		Rv3629c	0.67	-0.4
4,068,838	+		Rv3629c	0.80	-1.6
4,068,838	+		Rv3629c	0.80	-0.5
4,068,839	-		Rv3629c	0.80	+0.0
4,068,839	-		Rv3629c	0.80	+0.5
4,068,933	-		Rv3629c	0.89	+0.8
4,068,933	-		Rv3629c	0.89	+0.8
4,068,991	-				+0.2
4,068,991	-				-1.0
4,069,083	-				+1.4
4,069,147	+				-0.2
4,069,147	+				-0.5
4,069,256	-				-0.1
4,069,328	+		Rv3630	0.12	-0.1
4,069,460	+		Rv3630	0.22	+0.6
4,069,461	-		Rv3630	0.22	+0.6
4,069,962	+		Rv3630	0.61	+0.4