Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0409

Experiment: 7H9 with Pretomanid 0.213 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Pretomanid 0.213 ug/mL
492,869	-		Rv0408	0.52	-0.7
492,888	-		Rv0408	0.53	+0.5
493,356	+		Rv0408	0.76	+0.1
493,357	-		Rv0408	0.76	+0.9
493,364	+		Rv0408	0.76	+2.4
493,700	+				+0.0
493,806	+				+0.2
493,807	-				-0.4
494,287	-		Rv0409	0.38	+0.3
494,358	+		Rv0409	0.44	-0.4
494,359	-		Rv0409	0.44	+0.8
494,359	-		Rv0409	0.44	-0.3
494,557	-		Rv0409	0.61	-0.3
494,666	-		Rv0409	0.70	-0.3
494,745	+		Rv0409	0.77	+0.3
494,852	+		Rv0409	0.86	+0.2
495,064	-				-0.2