Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1693

Experiment: 7H9 with Pretomanid 0.213 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Pretomanid 0.213 ug/mL
1,916,844	+		Rv1692	0.14	-0.2
1,917,415	+		Rv1692	0.68	+0.0
1,917,442	+		Rv1692	0.70	-0.4
1,917,442	+		Rv1692	0.70	+2.0
1,917,442	+		Rv1692	0.70	+0.4
1,917,443	-		Rv1692	0.70	-0.6
1,917,742	-				-0.4
1,917,742	-				-0.1
1,917,747	-				-0.2
1,917,747	-				-0.3
1,917,799	+		Rv1693	0.24	-1.5
1,917,800	-		Rv1693	0.25	-0.7
1,918,148	+		Rv1694	0.26	-0.7
1,918,654	+		Rv1694	0.88	-0.4