Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3083

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
3,447,529	-		Rv3082c	0.12	+0.3
3,447,549	+		Rv3082c	0.14	+0.6
3,447,549	+		Rv3082c	0.14	+0.1
3,447,550	-		Rv3082c	0.14	-0.2
3,447,551	-		Rv3082c	0.14	-1.1
3,447,747	+		Rv3082c	0.34	-0.5
3,447,869	-		Rv3082c	0.45	-0.2
3,448,111	-		Rv3082c	0.69	+0.6
3,448,384	-				-0.2
3,448,384	-				-0.2
3,448,753	+		Rv3083	0.17	-0.2
3,448,753	+		Rv3083	0.17	-0.0
3,448,753	+		Rv3083	0.17	+0.1
3,448,906	+		Rv3083	0.27	-0.5
3,448,907	-		Rv3083	0.27	+0.7
3,448,927	+		Rv3083	0.28	+0.2
3,448,931	-		Rv3083	0.29	+0.8
3,448,937	-		Rv3083	0.29	+0.1
3,449,149	+		Rv3083	0.43	-0.1
3,449,149	+		Rv3083	0.43	+0.0
3,449,266	+		Rv3083	0.51	-0.1
3,449,321	+		Rv3083	0.55	+0.4
3,449,620	+		Rv3083	0.75	-0.5
3,449,620	+		Rv3083	0.75	+0.4
3,449,620	+		Rv3083	0.75	+0.0
3,449,621	-		Rv3083	0.75	+0.2
3,449,621	-		Rv3083	0.75	+0.3
3,449,671	+		Rv3083	0.78	+0.3
3,449,756	-		Rv3083	0.84	-1.3
3,449,830	+		Rv3083	0.89	-0.5
3,450,029	-				+0.8
3,450,029	-				+0.0
3,450,031	+				+0.1
3,450,031	+				-0.1
3,450,319	-		Rv3084	0.35	+0.7
3,450,619	+		Rv3084	0.67	-0.0
3,450,620	-		Rv3084	0.67	-0.1
3,450,620	-		Rv3084	0.67	-1.2
3,450,647	+		Rv3084	0.70	-0.9