Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1394c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,568,698	+		Rv1393c	0.40	-0.4
1,568,698	+		Rv1393c	0.40	+1.8
1,568,698	+		Rv1393c	0.40	+1.7
1,568,738	-		Rv1393c	0.43	+0.1
1,569,313	+		Rv1393c	0.81	+0.2
1,569,314	-		Rv1393c	0.81	+0.4
1,569,364	+		Rv1393c	0.85	-0.2
1,569,365	-		Rv1393c	0.85	-1.6
1,569,406	+		Rv1393c	0.88	-0.3
1,569,422	+		Rv1393c	0.89	-0.7
1,569,496	+				-0.7
1,569,496	+				-0.2
1,569,608	+				-0.5
1,569,608	+				-0.3
1,569,775	-		Rv1394c	0.14	-0.4
1,570,350	+		Rv1394c	0.55	-0.4
1,570,354	+		Rv1394c	0.56	-0.7
1,570,354	+		Rv1394c	0.56	+0.1
1,570,354	+		Rv1394c	0.56	+0.0
1,570,355	-		Rv1394c	0.56	+0.1
1,570,355	-		Rv1394c	0.56	-1.2
1,570,696	+		Rv1394c	0.80	-0.3
1,570,697	-		Rv1394c	0.80	-1.0
1,570,725	+		Rv1394c	0.82	+0.4
1,570,743	+		Rv1394c	0.84	-0.4
1,570,780	-		Rv1394c	0.86	-0.3
1,570,980	+				+0.7
1,570,980	+				-0.6
1,570,981	-				-0.3
1,570,981	-				+0.2
1,571,057	+				+0.6
1,571,058	-				+0.3
1,571,058	-				+0.8
1,571,089	+				+0.0
1,571,280	-		Rv1395	0.23	+0.0
1,571,280	-		Rv1395	0.23	-0.5
1,571,358	+		Rv1395	0.30	-0.2
1,571,359	-		Rv1395	0.30	-0.1
1,571,712	+		Rv1395	0.64	-0.9
1,571,727	+		Rv1395	0.66	-0.2
1,571,832	+		Rv1395	0.76	+0.3
1,571,954	+		Rv1395	0.88	-0.1
1,571,954	+		Rv1395	0.88	+0.3
1,571,954	+		Rv1395	0.88	+0.3