Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1180

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,312,792	+		Rv1179c	0.82	-0.1
1,312,792	+		Rv1179c	0.82	+0.7
1,312,792	+		Rv1179c	0.82	+0.4
1,312,793	-		Rv1179c	0.82	-0.9
1,312,793	-		Rv1179c	0.82	-0.4
1,312,797	-		Rv1179c	0.82	-0.3
1,312,839	-		Rv1179c	0.84	-0.0
1,312,975	-		Rv1179c	0.88	-0.4
1,313,247	-				-1.0
1,313,457	+				+0.2
1,313,557	+				+2.8
1,313,587	-				-1.9
1,313,627	+				+0.3
1,313,675	-				-0.7
1,313,879	-		Rv1180	0.10	+0.2
1,314,211	+		Rv1180	0.33	+1.1
1,314,601	+		Rv1180	0.60	+0.1
1,314,719	-		Rv1180	0.68	-0.3
1,315,106	+				+0.3
1,315,574	+				-0.8
1,315,575	-				+0.3
1,316,068	+		Rv1181	0.18	-0.7