Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0155

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
182,718	+		Rv0154c	0.60	-0.5
182,736	-		Rv0154c	0.62	+0.8
182,736	-		Rv0154c	0.62	-0.8
182,736	-		Rv0154c	0.62	+0.5
183,019	+		Rv0154c	0.85	-2.3
183,020	-		Rv0154c	0.85	+0.1
183,020	-		Rv0154c	0.85	-0.8
183,020	-		Rv0154c	0.85	-0.3
183,110	+				+0.8
183,221	+				+0.1
183,221	+				-0.4
183,222	-				+0.1
183,225	+				-0.3
183,225	+				-0.2
183,245	+				+1.1
183,245	+				+0.0
183,246	-				-0.8
183,246	-				+1.7
183,246	-				-1.1
183,246	-				-0.8
183,246	-				-1.0
183,345	+				+0.1
183,345	+				+0.2
183,346	-				-1.4
183,406	-				+1.3
183,508	+				-0.2
183,509	-				+1.2
183,549	-				+0.2
183,549	-				-0.8
183,599	+				+0.8
183,600	-				-0.1
183,615	-				+0.2
183,925	-		Rv0155	0.28	-0.1
184,051	+		Rv0155	0.39	+0.1
184,051	+		Rv0155	0.39	+0.1
184,054	-		Rv0155	0.39	-1.9
184,054	-		Rv0155	0.39	+1.8
184,216	+		Rv0155	0.54	+2.5
184,217	-		Rv0155	0.54	+0.0
184,217	-		Rv0155	0.54	+1.4
184,607	-		Rv0155	0.89	-0.6
184,607	-		Rv0155	0.89	+0.1
184,720	+				-0.4
184,721	-				-0.8
184,721	-				+0.6
184,726	+				-0.8
185,082	+				+0.8
185,083	-				-0.7
185,109	+				-0.6
185,110	-				-0.2
185,487	-		Rv0157	0.30	+0.5
185,487	-		Rv0157	0.30	-0.7
185,487	-		Rv0157	0.30	+0.0
185,487	-		Rv0157	0.30	+1.8