Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3229c

Experiment: 7H9 with Meropenem 9.6 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Meropenem 9.6 ug/mL
3,605,786	+				-0.8
3,605,786	+				-0.6
3,605,787	-				-0.4
3,605,787	-				+0.0
3,605,787	-				+0.0
3,605,793	-				+0.0
3,605,951	-		Rv3229c	0.16	-1.0
3,606,389	-		Rv3229c	0.50	+0.7
3,606,640	+		Rv3229c	0.69	+0.3
3,606,641	-		Rv3229c	0.69	-1.9
3,606,641	-		Rv3229c	0.69	+0.6
3,606,911	-				+1.1
3,606,964	-				+0.6
3,607,068	-				-0.4
3,607,073	-				-0.8
3,607,113	+				+0.7
3,607,268	+		Rv3230c	0.14	+0.9
3,607,269	-		Rv3230c	0.14	+0.8
3,607,269	-		Rv3230c	0.14	+0.8
3,607,659	-		Rv3230c	0.48	-0.0
3,607,714	+		Rv3230c	0.53	+0.9
3,607,714	+		Rv3230c	0.53	+1.4
3,607,971	+		Rv3230c	0.75	+0.9
3,607,972	-		Rv3230c	0.75	+0.8
3,607,972	-		Rv3230c	0.75	+1.0