Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3166c

Experiment: 7H9 with Meropenem 9.6 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Meropenem 9.6 ug/mL
3,533,427	+		Rv3164c	0.50	-0.3
3,533,427	+		Rv3164c	0.50	+0.5
3,533,428	-		Rv3164c	0.50	-0.7
3,533,439	+		Rv3164c	0.52	-0.1
3,533,900	-				+0.0
3,533,916	+				-1.5
3,534,080	+		Rv3165c	0.35	+0.1
3,534,395	+				-0.1
3,534,526	+		Rv3166c	0.14	+0.2
3,534,639	+		Rv3166c	0.26	-0.1
3,534,639	+		Rv3166c	0.26	+1.7
3,534,805	+		Rv3166c	0.43	-0.2
3,535,340	-				-0.2
3,535,342	+				+0.2
3,535,421	+				-0.6
3,535,650	+		Rv3167c	0.35	-0.6
3,535,703	+		Rv3167c	0.43	-0.5
3,535,704	-		Rv3167c	0.44	+0.8
3,535,855	-		Rv3167c	0.68	-1.3
3,536,182	-				-0.5