Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2793c

Experiment: 7H9 with Meropenem 9.6 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Meropenem 9.6 ug/mL
3,101,463	+				-0.5
3,101,464	-				+0.1
3,101,464	-				+1.2
3,102,000	-		Rv2792c	0.72	-0.2
3,102,027	+		Rv2792c	0.77	-0.3
3,102,027	+		Rv2792c	0.77	-1.0
3,102,162	+				-0.9
3,102,162	+				-0.1
3,102,163	-				-0.5
3,102,194	+				-0.5
3,102,195	-				+0.1
3,102,195	-				-0.4
3,102,265	-				+0.5
3,102,274	-				-0.2
3,102,315	+				+0.8
3,102,315	+				+0.2
3,102,471	-		Rv2793c	0.12	-0.7
3,102,728	+		Rv2793c	0.41	+0.4
3,104,047	-		Rv2795c	0.11	-0.3
3,104,182	-		Rv2795c	0.25	+0.2