Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0940c

Experiment: 7H9 with Meropenem 9.6 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Meropenem 9.6 ug/mL
1,050,248	+				+0.3
1,050,248	+				+0.1
1,051,318	-		Rv0940c	0.84	+0.3
1,051,446	+				-0.3
1,051,498	+				-0.2
1,051,793	+		Rv0941c	0.32	-0.5
1,051,822	+		Rv0941c	0.36	-0.2
1,051,823	-		Rv0941c	0.36	+2.9
1,052,057	+		Rv0941c	0.66	-0.2
1,052,058	-		Rv0941c	0.66	-0.5
1,052,149	+		Rv0941c	0.78	-0.1
1,052,260	+				-0.3
1,052,260	+				-1.2
1,052,261	-				-0.2
1,052,261	-				+0.1
1,052,261	-				+0.2
1,052,261	-				-0.2
1,052,261	-				-0.4
1,052,379	+				-0.5
1,052,380	-				+0.1