Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0923c

Experiment: 7H9 with Meropenem 9.6 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Meropenem 9.6 ug/mL
1,028,776	-		Rv0922	0.66	-0.1
1,028,822	+		Rv0922	0.69	-0.2
1,028,823	-		Rv0922	0.69	-0.2
1,029,090	+		Rv0922	0.85	-0.2
1,029,217	+				+0.4
1,029,217	+				-0.7
1,029,267	+				+0.0
1,029,268	-				-0.1
1,029,348	-				-1.1
1,029,348	-				-0.1
1,029,515	-				-0.1
1,029,515	-				+0.3
1,029,515	-				+0.3
1,029,515	-				-1.7
1,029,627	+		Rv0923c	0.11	+0.3
1,029,922	+		Rv0923c	0.38	+0.2
1,029,922	+		Rv0923c	0.38	+0.4
1,029,922	+		Rv0923c	0.38	+0.0
1,029,946	+		Rv0923c	0.41	-0.1
1,029,946	+		Rv0923c	0.41	-0.1
1,030,171	+		Rv0923c	0.62	-0.3
1,030,171	+		Rv0923c	0.62	+0.1
1,030,228	-		Rv0923c	0.67	-0.1
1,030,231	+		Rv0923c	0.67	-0.2
1,030,273	+		Rv0923c	0.71	-0.1
1,030,273	+		Rv0923c	0.71	-0.2
1,030,274	-		Rv0923c	0.71	+0.3
1,030,274	-		Rv0923c	0.71	+0.9
1,030,274	-		Rv0923c	0.71	-0.2
1,030,555	+				+0.3
1,030,556	-				-1.3
1,030,556	-				-0.4
1,030,556	-				+0.6
1,030,737	-		Rv0924c	0.12	+1.4
1,030,796	+		Rv0924c	0.17	-0.2
1,030,827	+		Rv0924c	0.19	-1.1
1,030,828	-		Rv0924c	0.19	-2.2
1,030,891	+		Rv0924c	0.24	-0.9
1,030,892	-		Rv0924c	0.24	-0.4