Experiment: 7H9 with Meropenem 9.6 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0363c and Rv0364 are separated by 95 nucleotides Rv0364 and Rv0365c overlap by 12 nucleotides Rv0365c and Rv0366c are separated by 24 nucleotides Rv0366c and Rv0367c are separated by 28 nucleotides
Rv0363c: Rv0363c - Probable fructose-bisphosphate aldolase Fba, at 441,265 to 442,299
Rv0363c
Rv0364: Rv0364 - Possible conserved transmembrane protein, at 442,395 to 443,078
Rv0364
Rv0365c: Rv0365c - Conserved protein, at 443,067 to 444,197
Rv0365c
Rv0366c: Rv0366c - Conserved hypothetical protein, at 444,222 to 444,815
Rv0366c
Rv0367c: Rv0367c - Hypothetical protein, at 444,844 to 445,233
Rv0367c
Position (kb) 443
444
445 Strain fitness (log2 ratio) -1
0
1
2
3 at 442.381 kb on + strand at 443.068 kb on + strand at 443.165 kb on + strand at 443.165 kb on + strand at 443.165 kb on + strand at 443.166 kb on - strand at 443.166 kb on - strand at 443.166 kb on - strand at 443.166 kb on - strand at 443.166 kb on - strand at 443.276 kb on - strand, within Rv0365c at 443.384 kb on - strand, within Rv0365c at 443.436 kb on + strand, within Rv0365c at 443.437 kb on - strand, within Rv0365c at 443.572 kb on + strand, within Rv0365c at 443.572 kb on + strand, within Rv0365c at 443.573 kb on - strand, within Rv0365c at 443.579 kb on - strand, within Rv0365c at 443.619 kb on + strand, within Rv0365c at 443.619 kb on + strand, within Rv0365c at 443.619 kb on + strand, within Rv0365c at 443.857 kb on - strand, within Rv0365c at 443.915 kb on - strand, within Rv0365c at 443.915 kb on - strand, within Rv0365c at 443.917 kb on + strand, within Rv0365c at 443.918 kb on - strand, within Rv0365c at 443.918 kb on - strand, within Rv0365c at 443.918 kb on - strand, within Rv0365c at 443.918 kb on - strand, within Rv0365c at 444.052 kb on + strand, within Rv0365c at 444.223 kb on + strand at 444.224 kb on - strand at 444.224 kb on - strand at 444.243 kb on - strand at 444.522 kb on + strand, within Rv0366c at 444.522 kb on + strand, within Rv0366c at 444.522 kb on + strand, within Rv0366c at 444.661 kb on + strand, within Rv0366c at 444.661 kb on + strand, within Rv0366c at 444.661 kb on + strand, within Rv0366c at 444.985 kb on - strand, within Rv0367c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Meropenem 9.6 ug/mL remove 442,381 + -1.0 443,068 + -0.6 443,165 + -0.4 443,165 + -0.2 443,165 + -0.0 443,166 - +0.0 443,166 - +0.3 443,166 - +0.1 443,166 - -0.6 443,166 - +2.6 443,276 - Rv0365c 0.18 -0.1 443,384 - Rv0365c 0.28 -0.1 443,436 + Rv0365c 0.33 +0.8 443,437 - Rv0365c 0.33 -0.2 443,572 + Rv0365c 0.45 +0.3 443,572 + Rv0365c 0.45 +0.4 443,573 - Rv0365c 0.45 -0.0 443,579 - Rv0365c 0.45 -0.3 443,619 + Rv0365c 0.49 +0.3 443,619 + Rv0365c 0.49 +1.1 443,619 + Rv0365c 0.49 -0.5 443,857 - Rv0365c 0.70 -1.0 443,915 - Rv0365c 0.75 +0.2 443,915 - Rv0365c 0.75 +0.7 443,917 + Rv0365c 0.75 +3.5 443,918 - Rv0365c 0.75 -0.2 443,918 - Rv0365c 0.75 -0.4 443,918 - Rv0365c 0.75 -0.5 443,918 - Rv0365c 0.75 +0.0 444,052 + Rv0365c 0.87 +0.3 444,223 + +0.6 444,224 - -0.4 444,224 - +0.1 444,243 - -0.3 444,522 + Rv0366c 0.51 -0.1 444,522 + Rv0366c 0.51 -0.5 444,522 + Rv0366c 0.51 -0.4 444,661 + Rv0366c 0.74 -0.0 444,661 + Rv0366c 0.74 +0.0 444,661 + Rv0366c 0.74 +0.1 444,985 - Rv0367c 0.36 -0.6
Or see this region's nucleotide sequence