Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3528c

Experiment: 7H9 with Meropenem 9.6 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Meropenem 9.6 ug/mL
3,963,807	-		Rv3527	0.45	-0.3
3,964,026	-				-1.0
3,964,152	-				-0.2
3,964,152	-				+0.0
3,964,152	-				-0.1
3,964,152	-				+0.5
3,964,152	-				-0.9
3,964,276	-				-0.5
3,964,793	+		Rv3528c	0.44	+0.1
3,964,826	-		Rv3528c	0.49	+0.1
3,964,829	+		Rv3528c	0.49	+0.0
3,964,838	+		Rv3528c	0.50	+0.3
3,964,839	-		Rv3528c	0.50	+0.9
3,964,946	+		Rv3528c	0.65	+0.0
3,965,014	-		Rv3528c	0.75	+0.4
3,965,204	+				+0.3
3,965,237	-				+0.3
3,965,443	+				-2.4
3,965,559	-				+1.3
3,965,838	+				-0.5
3,966,048	+		Rv3529c	0.14	-0.3
3,966,049	-		Rv3529c	0.14	-0.8