Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3026c

Experiment: 7H9 with Meropenem 9.6 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Meropenem 9.6 ug/mL
3,385,081	-				-0.4
3,385,165	-				-0.1
3,385,404	+		Rv3026c	0.26	-0.3
3,385,404	+		Rv3026c	0.26	+1.4
3,385,688	+		Rv3026c	0.57	+0.5
3,385,688	+		Rv3026c	0.57	-0.2
3,385,690	+		Rv3026c	0.58	-1.2
3,385,690	+		Rv3026c	0.58	-0.3
3,385,691	-		Rv3026c	0.58	-0.3
3,385,819	+		Rv3026c	0.72	+0.2
3,385,869	+		Rv3026c	0.77	+0.1
3,386,132	+				+0.8
3,386,238	-		Rv3027c	0.19	+0.5
3,386,327	+		Rv3027c	0.30	+0.4
3,386,328	-		Rv3027c	0.30	-0.4
3,386,425	+		Rv3027c	0.41	-0.5
3,386,447	+		Rv3027c	0.44	+0.1
3,386,448	-		Rv3027c	0.44	-0.1
3,386,448	-		Rv3027c	0.44	+0.2
3,386,448	-		Rv3027c	0.44	-0.1
3,386,448	-		Rv3027c	0.44	-0.4
3,386,454	-		Rv3027c	0.45	-0.7
3,386,607	-		Rv3027c	0.63	-0.5
3,386,607	-		Rv3027c	0.63	+0.0
3,386,705	+		Rv3027c	0.75	-0.9
3,386,769	+		Rv3027c	0.82	+0.2
3,386,770	-		Rv3027c	0.82	+0.8
3,386,830	+		Rv3027c	0.89	-0.2
3,386,831	-		Rv3027c	0.89	+0.2
3,386,897	-				-0.8
3,386,919	+				-1.2
3,386,919	+				+0.1
3,386,919	+				-2.0
3,386,919	+				+0.2
3,386,947	+				-0.4
3,387,076	+				-0.5