Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2963

Experiment: 7H9 with Meropenem 9.6 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Meropenem 9.6 ug/mL
3,314,362	+		Rv2962c	0.44	-0.1
3,314,386	+		Rv2962c	0.45	-0.2
3,314,386	+		Rv2962c	0.45	-0.2
3,314,587	-		Rv2962c	0.60	+0.2
3,314,632	+		Rv2962c	0.64	-0.8
3,314,654	-		Rv2962c	0.65	-0.9
3,314,759	-		Rv2962c	0.73	+0.3
3,314,782	+		Rv2962c	0.75	+0.2
3,314,783	-		Rv2962c	0.75	-0.6
3,314,866	-		Rv2962c	0.81	-0.0
3,314,908	+		Rv2962c	0.84	+0.6
3,315,103	+				-0.0
3,315,103	+				-0.6
3,315,104	-				-0.4
3,315,104	-				-0.2
3,315,157	-				-0.4
3,315,218	+				-0.2
3,315,438	+		Rv2963	0.17	+0.4
3,315,439	-		Rv2963	0.17	+0.5
3,315,480	-		Rv2963	0.20	+2.3
3,315,508	-		Rv2963	0.22	+0.2
3,315,508	-		Rv2963	0.22	-0.8
3,315,991	-		Rv2963	0.62	+2.3
3,316,110	+		Rv2963	0.72	+0.8
3,316,111	-		Rv2963	0.72	-0.4
3,316,111	-		Rv2963	0.72	+0.8
3,316,111	-		Rv2963	0.72	+0.0
3,316,116	+		Rv2963	0.72	-0.1
3,316,133	-		Rv2963	0.73	-0.3
3,316,141	+		Rv2963	0.74	-0.2
3,316,142	-		Rv2963	0.74	-0.1
3,316,142	-		Rv2963	0.74	-0.2
3,316,187	+		Rv2963	0.78	-0.9
3,316,298	+		Rv2963	0.87	+0.1
3,316,299	-		Rv2963	0.87	-0.3
3,316,627	-		Rv2964	0.11	-0.5
3,316,874	-		Rv2964	0.37	+0.3
3,317,005	-		Rv2964	0.51	+0.1
3,317,028	+		Rv2964	0.53	-0.0
3,317,029	-		Rv2964	0.54	-0.0
3,317,029	-		Rv2964	0.54	-0.3
3,317,033	-		Rv2964	0.54	-0.2
3,317,110	-		Rv2964	0.62	-0.1
3,317,123	+		Rv2964	0.64	-0.7
3,317,273	+		Rv2964	0.80	+0.3
3,317,273	+		Rv2964	0.80	-0.1