Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3772

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
4,216,278	-				-0.4
4,216,525	+		Rv3771c	0.37	-0.7
4,216,526	-		Rv3771c	0.37	+0.6
4,216,743	+				-0.5
4,216,743	+				-1.1
4,216,744	-				-0.2
4,216,744	-				+0.6
4,216,744	-				-1.2
4,216,833	+				-0.2
4,216,834	-				-1.5
4,217,123	-				-0.3
4,217,123	-				+0.2
4,217,692	+		Rv3772	0.53	+0.4
4,217,692	+		Rv3772	0.53	+0.2
4,217,693	-		Rv3772	0.53	-0.2
4,217,701	+		Rv3772	0.53	+0.1
4,217,701	+		Rv3772	0.53	+0.1
4,217,702	-		Rv3772	0.53	-0.0
4,217,702	-		Rv3772	0.53	+1.0
4,217,732	+		Rv3772	0.56	+0.1
4,217,732	+		Rv3772	0.56	+0.4
4,217,733	-		Rv3772	0.56	+1.3
4,217,733	-		Rv3772	0.56	-1.3
4,217,772	+		Rv3772	0.60	-0.0
4,217,861	-		Rv3772	0.68	-0.4
4,217,871	+		Rv3772	0.69	+0.1
4,217,872	-		Rv3772	0.69	-0.3
4,217,941	-		Rv3772	0.76	+0.1
4,218,243	-				-0.4
4,218,337	-		Rv3773c	0.16	-0.2
4,218,373	+		Rv3773c	0.23	-0.3
4,218,380	+		Rv3773c	0.24	+0.1
4,218,381	-		Rv3773c	0.24	-1.2
4,218,511	+		Rv3773c	0.46	-0.1
4,218,511	+		Rv3773c	0.46	-0.5
4,218,511	+		Rv3773c	0.46	-0.7
4,218,512	-		Rv3773c	0.46	-0.1
4,218,512	-		Rv3773c	0.46	+0.0
4,218,512	-		Rv3773c	0.46	-0.2
4,218,826	-				+1.0
4,218,861	+				+0.2
4,219,041	+		Rv3774	0.23	+0.2
4,219,054	+		Rv3774	0.25	-0.4
4,219,055	-		Rv3774	0.25	-2.2
4,219,055	-		Rv3774	0.25	-0.5
4,219,136	-		Rv3774	0.35	-0.1
4,219,136	-		Rv3774	0.35	-0.4