Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3637

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
4,075,494	-				+1.1
4,075,646	+				+1.1
4,075,646	+				+0.2
4,075,655	+				+0.0
4,075,655	+				+0.3
4,075,731	+				-0.1
4,076,056	-		Rv3636	0.87	-0.4
4,076,086	+				-0.4
4,076,087	-				-0.8
4,076,087	-				+0.9
4,076,257	+				-0.5
4,076,258	-				+2.7
4,076,258	-				+0.6
4,076,523	-				-0.4
4,076,689	-		Rv3637	0.41	-1.9
4,076,689	-		Rv3637	0.41	-0.5
4,076,946	+				+0.6
4,076,946	+				-0.4
4,076,947	-				-0.8
4,076,947	-				-0.4
4,076,947	-				-0.8
4,076,947	-				-0.3
4,076,947	-				+0.3
4,077,035	+				-0.2
4,077,119	+		Rv3638	0.18	+0.8
4,077,120	-		Rv3638	0.18	-0.8
4,077,120	-		Rv3638	0.18	+0.1
4,077,120	-		Rv3638	0.18	+1.5
4,077,273	+		Rv3638	0.39	+0.8
4,077,306	+		Rv3638	0.43	+0.2
4,077,306	+		Rv3638	0.43	-1.6
4,077,473	+		Rv3638	0.65	-0.3
4,077,473	+		Rv3638	0.65	-0.1
4,077,473	+		Rv3638	0.65	-0.4
4,077,562	+		Rv3638	0.77	+0.1
4,077,588	+		Rv3638	0.81	+0.3
4,077,672	-				+0.1
4,077,790	+				+0.5
4,077,791	-				+0.6
4,077,792	-				-0.6
4,077,939	+				+0.0
4,077,957	+		Rv3639c	0.13	+0.2
4,077,957	+		Rv3639c	0.13	-2.0
4,077,957	+		Rv3639c	0.13	-0.2
4,077,957	+		Rv3639c	0.13	+0.5
4,077,958	-		Rv3639c	0.13	-0.2
4,077,958	-		Rv3639c	0.13	-0.3
4,077,958	-		Rv3639c	0.13	-2.1
4,077,958	-		Rv3639c	0.13	-1.2
4,077,958	-		Rv3639c	0.13	+0.3