Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3395A

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,810,818	+		Rv3394c	0.87	+0.0
3,810,818	+		Rv3394c	0.87	+0.5
3,810,989	+				-0.3
3,810,990	-				-0.1
3,811,113	+		Rv3395c	0.15	-0.2
3,811,730	+				-0.1
3,811,730	+				-0.6
3,811,730	+				+0.1
3,811,777	+				-0.4
3,812,082	+		Rv3395A	0.58	-0.6
3,812,083	-		Rv3395A	0.58	-0.7
3,812,083	-		Rv3395A	0.58	-0.1
3,812,083	-		Rv3395A	0.58	-0.8
3,812,230	+		Rv3395A	0.81	-0.7
3,812,343	+				+0.4
3,812,343	+				+0.5
3,812,344	-				-1.3
3,812,392	+				-0.5
3,812,392	+				+1.6
3,812,433	+				-0.3
3,812,434	-				+1.1
3,812,449	+				-1.2
3,812,449	+				-0.9
3,812,449	+				-0.4
3,812,449	+				-0.3
3,812,449	+				-2.1
3,812,450	-				-0.3
3,812,450	-				+1.4
3,812,486	+				+1.0
3,812,502	+				-1.8