Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3376

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,789,359	-		Rv3375	0.52	+0.0
3,790,115	-				+0.3
3,790,165	-				-1.6
3,790,397	+		Rv3376	0.37	-3.2
3,790,411	+		Rv3376	0.39	+1.1
3,790,412	-		Rv3376	0.39	+1.5
3,790,412	-		Rv3376	0.39	-0.5
3,790,433	-		Rv3376	0.42	+0.4
3,790,616	-		Rv3376	0.70	-1.3
3,790,720	+		Rv3376	0.86	+0.9
3,790,721	-		Rv3376	0.86	+0.6
3,790,885	-				+1.0
3,790,898	+				+1.4
3,790,898	+				+1.2
3,790,899	-				+2.0
3,790,903	-				+1.2
3,790,903	-				+1.2
3,790,918	+				+2.0
3,790,948	+				+2.0
3,790,971	+				+1.2
3,790,972	-				+2.2
3,791,054	-		Rv3377c	0.14	+1.2
3,791,162	-		Rv3377c	0.21	+1.0
3,791,406	+		Rv3377c	0.37	+1.7
3,791,553	+		Rv3377c	0.47	+1.2
3,791,553	+		Rv3377c	0.47	+1.2
3,791,554	-		Rv3377c	0.47	+1.1
3,791,554	-		Rv3377c	0.47	-0.4