Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3033
Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Dimethyl Sulfoxide 1 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 3,392,777 | - | +0.1 | |||
| 3,392,879 | + | Rv3032A | 0.17 | +0.1 | |
| 3,393,793 | - | Rv3033 | 0.75 | -0.9 | |
| 3,394,769 | + | Rv3034c | 0.83 | +0.0 | |
| 3,394,769 | + | Rv3034c | 0.83 | -0.4 | |
| 3,394,769 | + | Rv3034c | 0.83 | -0.9 | |
| 3,394,769 | + | Rv3034c | 0.83 | +0.5 | |
| 3,394,770 | - | Rv3034c | 0.83 | -0.1 | |
| 3,394,770 | - | Rv3034c | 0.83 | -0.5 | |
| 3,394,774 | + | Rv3034c | 0.84 | -1.0 | |
| 3,394,774 | + | Rv3034c | 0.84 | +1.8 | |
| 3,394,775 | - | Rv3034c | 0.84 | -0.4 | |
| 3,394,775 | - | Rv3034c | 0.84 | +0.5 | |
| 3,394,775 | - | Rv3034c | 0.84 | -0.5 |
Or see this region's nucleotide sequence