Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3016

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,374,778	-		Rv3015c	0.13	-0.2
3,375,400	+		Rv3015c	0.74	-0.3
3,375,400	+		Rv3015c	0.74	+0.2
3,375,561	+		Rv3015c	0.90	+0.2
3,375,676	-				-0.1
3,375,786	+				+0.7
3,375,787	-				+0.1
3,375,787	-				+0.4
3,375,801	+				-0.1
3,375,802	-				+1.0
3,375,886	+		Rv3016	0.20	-0.3
3,375,971	+		Rv3016	0.34	-0.4
3,375,972	-		Rv3016	0.34	-1.8
3,375,972	-		Rv3016	0.34	-0.4
3,376,006	-		Rv3016	0.39	-0.6
3,376,225	+		Rv3016	0.74	-1.1
3,376,251	+		Rv3016	0.78	-0.6
3,376,251	+		Rv3016	0.78	-1.1
3,376,251	+		Rv3016	0.78	-0.1
3,376,283	+		Rv3016	0.83	-0.3
3,376,386	-				-0.6
3,376,626	-		Rv3017c	0.37	+1.7
3,376,648	-		Rv3017c	0.44	-0.1
3,376,789	+		Rv3017c	0.82	+0.0
3,376,789	+		Rv3017c	0.82	-0.3
3,376,790	-		Rv3017c	0.83	+0.0
3,376,836	+				-0.4
3,376,836	+				-0.2
3,376,836	+				-0.8
3,376,836	+				+0.2
3,376,836	+				+0.0
3,376,837	-				-0.6
3,376,837	-				-0.4
3,376,837	-				+2.0
3,376,837	-				-0.9
3,376,837	-				-0.4
3,376,837	-				+1.8
3,376,837	-				+0.4
3,376,837	-				-0.1
3,376,837	-				-1.2
3,376,837	-				-0.6
3,376,837	-				-0.6
3,376,837	-				-0.1
3,376,837	-				+0.8
3,376,841	-				-0.8