Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2900c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
3,208,435	-				-0.0
3,208,485	+				-0.3
3,208,485	+				-0.3
3,208,578	-				+0.2
3,209,069	+		Rv2899c	0.59	-0.5
3,209,139	-		Rv2899c	0.68	+2.3
3,209,510	-				-0.4
3,209,540	-				+0.0
3,209,734	+		Rv2900c	0.14	+0.2
3,209,734	+		Rv2900c	0.14	-0.3
3,209,905	+		Rv2900c	0.21	-1.3
3,209,906	-		Rv2900c	0.21	+0.4
3,209,956	+		Rv2900c	0.24	-0.1
3,210,465	+		Rv2900c	0.45	+0.1
3,210,465	+		Rv2900c	0.45	+0.2
3,210,466	-		Rv2900c	0.45	-0.3
3,210,590	+		Rv2900c	0.51	+0.3
3,210,716	-		Rv2900c	0.56	-0.8
3,211,225	+		Rv2900c	0.78	+1.3
3,211,225	+		Rv2900c	0.78	-0.6
3,211,226	-		Rv2900c	0.78	+0.4
3,211,226	-		Rv2900c	0.78	-2.0
3,211,226	-		Rv2900c	0.78	-0.0
3,211,283	-		Rv2900c	0.80	+1.5
3,211,434	-		Rv2900c	0.87	-0.6
3,211,544	+				-0.4
3,211,617	+				+0.4
3,211,618	-				-0.5
3,211,741	+				+0.1
3,211,741	+				+0.0
3,211,741	+				-1.0
3,211,741	+				-0.9
3,211,742	-				-0.2
3,211,742	-				-0.2
3,211,742	-				+0.3
3,211,804	+				+0.2
3,211,804	+				-0.0
3,211,805	-				+1.0
3,211,805	-				-0.2
3,211,900	+		Rv2901c	0.32	+0.7
3,211,943	-		Rv2901c	0.46	+0.5
3,211,993	+		Rv2901c	0.62	+0.6
3,212,013	+		Rv2901c	0.69	+0.3
3,212,014	-		Rv2901c	0.69	+1.7
3,212,084	-				+0.2
3,212,163	+				+1.0
3,212,164	-				-0.8
3,212,164	-				-0.5
3,212,328	+		Rv2902c	0.21	+0.4
3,212,329	-		Rv2902c	0.21	-1.1
3,212,389	-		Rv2902c	0.29	+3.0
3,212,611	+		Rv2902c	0.56	+0.6
3,212,611	+		Rv2902c	0.56	-0.5
3,212,612	-		Rv2902c	0.57	-0.9
3,212,612	-		Rv2902c	0.57	-0.5
3,212,612	-		Rv2902c	0.57	+0.4
3,212,679	+		Rv2902c	0.65	-1.3
3,212,680	-		Rv2902c	0.65	+0.1