Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2046

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
2,290,319	+		Rv2045c	0.41	+0.4
2,290,556	-		Rv2045c	0.57	-1.4
2,290,793	+		Rv2045c	0.72	-0.5
2,290,793	+		Rv2045c	0.72	+0.4
2,290,829	+		Rv2045c	0.74	-0.4
2,290,830	-		Rv2045c	0.75	+0.5
2,290,886	-		Rv2045c	0.78	-0.6
2,291,100	-				+1.2
2,291,190	+				+0.2
2,291,191	-				-0.2
2,291,340	-		Rv2046	0.11	-1.0
2,291,557	-		Rv2046	0.44	-0.3
2,291,726	-		Rv2046	0.70	-0.6
2,291,818	+		Rv2046	0.84	-1.1
2,291,957	+				-0.1
2,291,957	+				+0.2
2,291,957	+				-0.2
2,291,958	-				-0.1
2,292,082	-				+0.6
2,292,082	-				-0.6
2,292,183	-				-1.0
2,292,319	+		Rv2047c	0.14	-0.0
2,292,743	+		Rv2047c	0.30	+0.4
2,292,841	+		Rv2047c	0.34	-0.9
2,292,842	-		Rv2047c	0.34	+0.6