Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1541c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
1,742,797	+				+0.4
1,742,797	+				-0.6
1,742,797	+				+1.0
1,742,827	+				-0.8
1,742,827	+				+0.4
1,742,827	+				+1.8
1,742,827	+				-0.4
1,742,827	+				+0.0
1,743,845	+		Rv1541c	0.11	+0.7
1,743,846	-		Rv1541c	0.11	+0.6
1,743,846	-		Rv1541c	0.11	-0.0
1,743,957	-		Rv1541c	0.30	+0.2
1,744,065	-		Rv1541c	0.48	+0.7
1,744,250	-		Rv1541c	0.79	-0.6
1,744,383	-				-1.3
1,744,578	+		Rv1542c	0.37	-0.1
1,744,579	-		Rv1542c	0.37	+0.2
1,744,739	+		Rv1542c	0.76	-0.5
1,744,739	+		Rv1542c	0.76	-1.2
1,744,739	+		Rv1542c	0.76	-0.2
1,744,740	-		Rv1542c	0.76	+0.1
1,744,790	+		Rv1542c	0.89	-0.3
1,745,004	-				-1.3
1,745,004	-				+0.6
1,745,006	+				+0.6
1,745,007	-				-0.5
1,745,163	+				-0.6
1,745,163	+				-0.5