Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1364c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
1,535,155	-		Rv1363c	0.70	-0.5
1,535,155	-		Rv1363c	0.70	-0.1
1,535,173	-		Rv1363c	0.72	-0.6
1,535,199	+		Rv1363c	0.75	-0.5
1,535,400	-				+0.2
1,535,413	-				+0.2
1,535,447	+				+0.1
1,535,461	-				-0.7
1,535,572	+				-1.5
1,535,572	+				+0.4
1,536,081	+		Rv1364c	0.20	-0.9
1,536,082	-		Rv1364c	0.20	-0.8
1,536,133	+		Rv1364c	0.23	-0.4
1,536,668	+		Rv1364c	0.50	-2.0
1,536,669	-		Rv1364c	0.50	-0.6
1,536,761	+		Rv1364c	0.55	-1.4
1,536,892	-		Rv1364c	0.62	-0.9
1,537,101	-		Rv1364c	0.72	-0.6
1,537,165	-		Rv1364c	0.76	-0.5
1,537,430	+		Rv1364c	0.89	-0.3
1,537,431	-		Rv1364c	0.89	-0.8
1,537,595	-				+0.3
1,537,595	-				-0.4
1,537,672	-				-0.9
1,537,784	+				+0.4
1,537,784	+				+0.3
1,537,785	-				-0.1
1,537,819	+				-1.4
1,537,820	-				-0.2
1,537,839	-		Rv1365c	0.14	+0.9
1,538,248	+				-0.6
1,538,248	+				-0.5
1,538,248	+				+0.6
1,538,248	+				-0.9
1,538,249	-				+0.1
1,538,249	-				-0.4
1,538,250	+				-0.5
1,538,250	+				-0.5
1,538,251	-				+1.1
1,538,251	-				+0.0
1,538,274	-				-0.8
1,538,276	-				-0.1
1,538,397	+				-0.6
1,538,407	-				+1.0
1,538,407	-				-1.3
1,538,604	+		Rv1366	0.26	+0.6
1,538,605	-		Rv1366	0.26	-0.3
1,538,605	-		Rv1366	0.26	-1.8
1,538,605	-		Rv1366	0.26	+0.1
1,538,605	-		Rv1366	0.26	-1.2
1,538,611	+		Rv1366	0.27	-0.5
1,538,611	+		Rv1366	0.27	+1.0