Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1244

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
1,386,027	+		Rv1243c	0.61	+1.0
1,386,120	+		Rv1243c	0.67	+1.0
1,386,239	+		Rv1243c	0.74	+0.0
1,386,240	-		Rv1243c	0.74	-0.4
1,386,268	+		Rv1243c	0.76	-1.0
1,386,268	+		Rv1243c	0.76	+1.2
1,386,418	+		Rv1243c	0.85	-0.6
1,386,493	+		Rv1243c	0.89	+1.4
1,386,493	+		Rv1243c	0.89	-0.5
1,386,537	+				+1.8
1,386,537	+				+0.7
1,386,537	+				+0.7
1,386,537	+				+0.0
1,386,537	+				-0.0
1,386,594	-				+0.3
1,386,670	+				+2.0
1,386,670	+				-0.2
1,386,670	+				+0.0
1,386,670	+				-0.2
1,386,670	+				-0.5
1,386,671	-				-0.1
1,386,837	-				-0.2
1,387,007	+		Rv1244	0.17	-0.8
1,387,008	-		Rv1244	0.18	-0.3
1,387,170	+		Rv1244	0.36	+0.1
1,387,170	+		Rv1244	0.36	-0.5
1,387,170	+		Rv1244	0.36	+0.0
1,387,170	+		Rv1244	0.36	-1.1
1,387,170	+		Rv1244	0.36	-1.5
1,387,171	-		Rv1244	0.36	-1.9
1,387,172	+		Rv1244	0.37	-0.8
1,387,850	+				-0.5
1,387,987	-		Rv1245c	0.23	-0.4
1,388,367	-		Rv1245c	0.68	+0.9
1,388,367	-		Rv1245c	0.68	+0.0
1,388,417	-		Rv1245c	0.74	+1.4
1,388,438	-		Rv1245c	0.77	+0.7
1,388,438	-		Rv1245c	0.77	+0.6
1,388,633	+				-0.4
1,388,633	+				-0.4
1,388,633	+				-0.3
1,388,633	+				-1.3
1,388,634	-				-0.6
1,388,686	+				-1.1