Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0910 and Rv0911 are separated by 97 nucleotides Rv0911 and Rv0912 are separated by 64 nucleotides Rv0912 and Rv0913c are separated by 531 nucleotides
Rv0910: Rv0910 - Conserved hypothetical protein, at 1,014,866 to 1,015,300
Rv0910
Rv0911: Rv0911 - Conserved protein, at 1,015,398 to 1,016,171
Rv0911
Rv0912: Rv0912 - Probable conserved transmembrane protein, at 1,016,236 to 1,016,685
Rv0912
Rv0913c: Rv0913c - Possible dioxygenase, at 1,017,217 to 1,018,725
Rv0913c
Position (kb)
1016
1017 Strain fitness (log2 ratio)
-2
-1
0
1 at 1015.404 kb on - strand at 1015.409 kb on + strand at 1015.412 kb on + strand at 1015.482 kb on + strand, within Rv0911 at 1015.528 kb on - strand, within Rv0911 at 1015.537 kb on - strand, within Rv0911 at 1015.623 kb on + strand, within Rv0911 at 1015.623 kb on + strand, within Rv0911 at 1015.623 kb on + strand, within Rv0911 at 1015.706 kb on - strand, within Rv0911 at 1016.015 kb on - strand, within Rv0911 at 1016.015 kb on - strand, within Rv0911 at 1016.221 kb on - strand at 1016.537 kb on - strand, within Rv0912 at 1016.581 kb on + strand, within Rv0912 at 1016.870 kb on + strand at 1017.377 kb on + strand, within Rv0913c at 1017.378 kb on - strand, within Rv0913c at 1017.476 kb on + strand, within Rv0913c at 1017.498 kb on - strand, within Rv0913c at 1017.679 kb on - strand, within Rv0913c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Dimethyl Sulfoxide 1 vol% remove 1,015,404 - +0.0 1,015,409 + -0.1 1,015,412 + +1.0 1,015,482 + Rv0911 0.11 +1.0 1,015,528 - Rv0911 0.17 -2.0 1,015,537 - Rv0911 0.18 -0.1 1,015,623 + Rv0911 0.29 -0.5 1,015,623 + Rv0911 0.29 -0.0 1,015,623 + Rv0911 0.29 +0.4 1,015,706 - Rv0911 0.40 -0.1 1,016,015 - Rv0911 0.80 +0.3 1,016,015 - Rv0911 0.80 -0.7 1,016,221 - -0.5 1,016,537 - Rv0912 0.67 -0.7 1,016,581 + Rv0912 0.77 -0.6 1,016,870 + +0.1 1,017,377 + Rv0913c 0.11 -0.3 1,017,378 - Rv0913c 0.11 -0.5 1,017,476 + Rv0913c 0.17 -0.5 1,017,498 - Rv0913c 0.19 +0.1 1,017,679 - Rv0913c 0.31 -1.7
Or see this region's nucleotide sequence