Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0689c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
788,174	+		Rv0688	0.19	+2.0
788,273	+		Rv0688	0.27	-0.6
788,605	-		Rv0688	0.54	-0.9
788,605	-		Rv0688	0.54	+0.1
789,032	+		Rv0688	0.89	+0.9
789,036	-		Rv0688	0.90	-0.2
789,142	-				-0.4
789,170	-				-0.4
789,213	+		Rv0689c	0.22	-0.2
789,213	+		Rv0689c	0.22	-2.1
789,214	-		Rv0689c	0.22	-0.1
789,214	-		Rv0689c	0.22	-1.3
789,418	+				-0.6
789,419	-				-1.0
789,695	+				-0.7
789,696	-				+0.4
790,101	+				-0.2
790,102	-				+0.3
790,105	+				+0.3
790,106	-				-0.8
790,106	-				-0.3
790,106	-				-1.0
790,106	-				-0.2
790,113	-				+0.2
790,244	+		Rv0690c	0.21	-0.2