Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0019c
Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Dimethyl Sulfoxide 1 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 22,455 | - | Rv0018c | 0.53 | -1.5 | |
| 23,382 | - | Rv0019c | 0.24 | -1.9 | |
| 23,382 | - | Rv0019c | 0.24 | -1.2 | |
| 23,443 | - | Rv0019c | 0.37 | -1.1 | |
| 23,443 | - | Rv0019c | 0.37 | -0.8 | |
| 23,513 | - | Rv0019c | 0.52 | -1.4 | |
| 23,641 | - | Rv0019c | 0.79 | -0.8 | |
| 23,856 | + | -0.2 | |||
| 23,857 | - | +0.1 |
Or see this region's nucleotide sequence