Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0017c

Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Dimethyl Sulfoxide 1 vol%
19,454	-		Rv0016c	0.47	-0.8
19,694	-		Rv0016c	0.63	-0.1
19,761	-		Rv0016c	0.68	-0.4
19,830	-		Rv0016c	0.73	-0.7
19,936	-		Rv0016c	0.80	-0.8
19,985	-		Rv0016c	0.83	+2.0
20,279	-				-0.6
20,346	-				+0.9
20,376	+		Rv0017c	0.10	+1.2
20,498	-		Rv0017c	0.19	+0.0
20,548	-		Rv0017c	0.22	-1.1
20,548	-		Rv0017c	0.22	-0.4
20,883	+		Rv0017c	0.46	-2.1
20,884	-		Rv0017c	0.46	-1.0
21,415	-		Rv0017c	0.84	-1.2
22,118	+		Rv0018c	0.31	-0.8
22,119	-		Rv0018c	0.31	-1.8
22,187	+		Rv0018c	0.36	+1.4
22,455	-		Rv0018c	0.53	-1.5