Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3591c
Experiment: 7H9 with Dimethyl Sulfoxide 1 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Dimethyl Sulfoxide 1 vol% |
---|---|---|---|---|---|
remove | |||||
4,032,812 | - | Rv3590c | 0.80 | +0.0 | |
4,032,899 | + | Rv3590c | 0.85 | -0.1 | |
4,032,899 | + | Rv3590c | 0.85 | +1.0 | |
4,032,900 | - | Rv3590c | 0.85 | -0.3 | |
4,032,975 | - | Rv3590c | 0.90 | -0.9 | |
4,033,367 | - | Rv3591c | 0.13 | -1.2 | |
4,033,458 | + | Rv3591c | 0.24 | +0.8 | |
4,033,611 | + | Rv3591c | 0.44 | -2.2 | |
4,033,918 | - | Rv3591c | 0.84 | -0.4 | |
4,034,181 | + | Rv3592 | 0.39 | -0.8 | |
4,034,181 | + | Rv3592 | 0.39 | +0.0 | |
4,034,207 | + | Rv3592 | 0.47 | +0.3 |
Or see this region's nucleotide sequence